Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3931 |
Symbol | |
ID | 1046634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4434872 |
End bp | 4436701 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637147341 |
Product | sodium/sulfate symporter family protein |
Protein accession | NP_746061 |
Protein GI | 26990636 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0534753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0578867 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCATG AGTTGCTCTG GGTCCTCGGC CTGCTGGCCA TCGTGATCAT CCTGTTCGTC ATCAACCGCC CACGCATGGA CGTGGTCGCG CTGCTGGTGA TTCTCGCCCT GCCACTACTC GGCATCCTTA CCGTGGAACA GGCCCTGGCC GGGTTCAGCG ACCCCAACGT GGTGCTGATC GCCGCGCTGT TCGTGATTGG CGAAGGCCTG GTGCGCACCG GCATTGCCTA TCGCATCGGC GAATGGATGA GCGAGCGGGC CGGCAATAGC GAAGCACGCC TGCTGGTACT GCTGATGGTG GCGGTGGCCG GGCTGGGATC GATAATGAGC TCCACCGGCG TGGTGGCCAT TTTCATCCCG GTGGTGCTGA GCATCGCTGC GCGCCTGCAG CTGTCACCCA GCCGCCTGAT GATGCCACTG GCTTTTGCCG GCCTCATCAG TGGCATGCTC AGCCTGGTCG CTACACCGCC CAACGTGGTG GTGCACAGCG AGCTGGTCCG CCATGGCGAA GCGGGGTTCA GCTTCTTCAG CTTTACCCCG TTCGGCCTGG TGGTGCTGGT ACTGGGCATT GGCTACATGC TGCTGACCCG GCACTGGCTC AACGGTGAAG TGCGTAAGGA CGGCCGGGTG GAAAGCCGCC GCACCTTGCT GGACCTGGTA CTGGACTACA AGCTCAACGG CCGTGAACGA CGCCTGCGCA TCCGCCCTCA GTCGCCGCTG ATCGGCCACA ACCTTGGCGA ACTGCAACTG CGCACCAGAC ACGGCGCCAA CGTGATCGGT ATCGAGCGCC AGCACAAGTT CACAACGCGC GTGATCGCGG CCGACTCGGG CACCGTGTTG CATCAGGGCG ACGTGCTGCT GCTCGATCTG TTCGCCAAGC ATGACGACCT GCGCAGCCTA TGCCAAACCA TGCACCTGGA GCCGCTGCAC TTCAAGGCCG CGTACTTCAT CGACCAGTCC CAGGATTTGG GAATGGCTGA GGTCTCGCTG CCGCCCGGCT CGCAGTTGAT CGGCAAGAGT ATTCTCGAAC TGGCGTTTCG CACCCGCTAT GGCCTCAACG TGGTCGGCCT GCGCCGCGAT CAGGCCGCTA TCGAAGAGCA ACTGGTGGAA GAAAAGCTGC GCCTTGGCGA CACGCTGCTG GTAGTCGGCC CGTGGAAGGC AGTACGCCAA TTGCAAAGCA AGCCCAAAGA TTTCCTGGTC CTGAGCTTGC CCGCCGAGAT CGACCTGGTC GCACCAGCCC GCACTCGCGC GCCGCAAGCG TTGCTTAGCC TGGCGGTAAT GGTCGGGCTA ATGGTCAGCG GCGCCGTACC CAATGTCATT GCAGCGTTGA TCGGCTGCTT GCTGATGGGC GCAGGCCGTT GCATCGACAT GAACAGTGCC TACCGCGCCA TCCACTGGCA AAGCCTGGTG CTGATCGTGG GCATGCTGCC CTTCGCCCAG GCGCTGCAGA AAACCGGCGG CATCGACCTG GCGGTGGGTG GGCTGGTGAA CGTGCTGGGT GGTGCCGGCC CCAGCGCCAT TCTTGCCTGC CTGTTCGCCG TCACCGCAGT GATCGGGCTG TTCATTTCCA ACACCGCCAC CGCGGTTCTG ATGGCGCCGG TGGCTGTCAG CACTGCGGCG CAGCTGGGCA TGTCGCCCTA CCCGTTCGCC ATGACCGTCG CACTGGCCGC GTCAGCGGCA TTCATGACGC CGGTGTCATC ACCGGTCAAC ACGCTGGTGC TTGGGCCCGG GCAATACCGC TTCGCTGACT TCGTCAAGAT TGGCGTGCCG TTCACCGTGC TGGTGATGCT GGTTACCGTC GTGATGGTGC CGTGGTTCTT CGGGCTGTGA
|
Protein sequence | MNHELLWVLG LLAIVIILFV INRPRMDVVA LLVILALPLL GILTVEQALA GFSDPNVVLI AALFVIGEGL VRTGIAYRIG EWMSERAGNS EARLLVLLMV AVAGLGSIMS STGVVAIFIP VVLSIAARLQ LSPSRLMMPL AFAGLISGML SLVATPPNVV VHSELVRHGE AGFSFFSFTP FGLVVLVLGI GYMLLTRHWL NGEVRKDGRV ESRRTLLDLV LDYKLNGRER RLRIRPQSPL IGHNLGELQL RTRHGANVIG IERQHKFTTR VIAADSGTVL HQGDVLLLDL FAKHDDLRSL CQTMHLEPLH FKAAYFIDQS QDLGMAEVSL PPGSQLIGKS ILELAFRTRY GLNVVGLRRD QAAIEEQLVE EKLRLGDTLL VVGPWKAVRQ LQSKPKDFLV LSLPAEIDLV APARTRAPQA LLSLAVMVGL MVSGAVPNVI AALIGCLLMG AGRCIDMNSA YRAIHWQSLV LIVGMLPFAQ ALQKTGGIDL AVGGLVNVLG GAGPSAILAC LFAVTAVIGL FISNTATAVL MAPVAVSTAA QLGMSPYPFA MTVALAASAA FMTPVSSPVN TLVLGPGQYR FADFVKIGVP FTVLVMLVTV VMVPWFFGL
|
| |