| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3889 |
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| Symbol | |
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| ID | 1046676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4406543 |
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| End bp | 4407841 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637147298 |
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| Product | phage integrase, putative |
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| Protein accession | NP_746019 |
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| Protein GI | 26990594 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000353876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCGCGA CCCGCGAAGT GAAGTTGAGC GAGGCCGAGG TGCGGCGTCA GGCGACCGAC
AAGTCGGTGC GCGACCTGCG TGACCCGCGT CACCCCGGCC TGTACCTGCG CTTTTGGAGC
AGCCGTGAGC GTGGTACCTG GCACCTGGTG CGCGGCAAGA AATGGGTACC GATCGCCCGC
TGGCCTGAGT TGAGCGTGGC GGCGGTGCTG GCCGAGCTGC CCGCGCTGCG TCAGCGCCTG
ATGCGCCACC CGGCCACCGC ACCGGTAGTG TCGGGCATGG CCACCGTGGG CCAACTGCTC
GACTGGTATG TCGACCGCAT GAGCCATGAT CGCTCGTTGT CTGCAAAGCG TAAGGCTGCC
ACCCGCGCAG CAATTGGGCA GCATGTGCGG CCGTGCTTAG GCGATCTGCC GATCAAGTAC
ATCACCGCCG AGCTGATTGA TAAGCACCTG ATCTGGCCCG GCCAGGCCAA GCTGTCCCTG
TCCTACCTGC GACAGATGTT CGGCATGCTG CTGACCGCCT TCCGCCAGGC CTTGAAGCTG
GGGATGATCG ATAGCAATCC CATGGCCGGG GTGCGCTTCA ACGACTTCAC CAAGGCCAAG
ATCCTGCCCA AGGCGGCCCG CCTGCGCAGC GTGCAGTTGC CGGAGCTGAT GCAGCAGCTG
GCCCAGGCCT TCGAGGCAGC CCCGAATGAC GCCATGCTGG CCCTGATGAT GCTGGCCCAC
GGTACCCGGA TCGGTGAGAC CCGCATGGCG CGCTGGAGTG AGGTCTCCTT GGCGGCGTCC
GAGTGGTTCA TCCCGGCAGC CCACACCAAG ACCCGCACCG AACATCGCCT GCCACTGACC
GCCCAGCTCA AGGCGCTGCT GACCCGCTAT CGGGGCATTC AGCAGGCCCG GGGTTATGAA
GGCGTCTACC TGTTCCCGAA CCGTCGCGGC CACTGCCTGA GTGAGACCCA GGCGAGCATG
GTGTTCACCC GGCTGGGGCA GGGCGAGTGG ACCAGCCACG ACCTGCGCAA GGTGTCCCGC
AGCACCTGGA CGGACCTCGG CATCGACGGC CACATCGGCG AGATGCTGCT GAACCACACG
CTGGGCAAGA TCGCCAGCAC CTACATCCAC ACCCAGGCCA TGGAGCAGCG CAAGTTGGCG
CTGGAGAAGT GGCACGCCTG GCTTGATCGG ATCGGCTTCG CAGCCATCCA CGGCCTTAAA
GAGGCCTTAT TTGAAATCCC GCAGAAATCG CCACAAGCCA ATGGCGGCGA GGCCTCAGGC
GACCTTAGCG AATTAGTATT TAGCGAGGAT TCGAAATGA
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| Protein sequence | MSATREVKLS EAEVRRQATD KSVRDLRDPR HPGLYLRFWS SRERGTWHLV RGKKWVPIAR
WPELSVAAVL AELPALRQRL MRHPATAPVV SGMATVGQLL DWYVDRMSHD RSLSAKRKAA
TRAAIGQHVR PCLGDLPIKY ITAELIDKHL IWPGQAKLSL SYLRQMFGML LTAFRQALKL
GMIDSNPMAG VRFNDFTKAK ILPKAARLRS VQLPELMQQL AQAFEAAPND AMLALMMLAH
GTRIGETRMA RWSEVSLAAS EWFIPAAHTK TRTEHRLPLT AQLKALLTRY RGIQQARGYE
GVYLFPNRRG HCLSETQASM VFTRLGQGEW TSHDLRKVSR STWTDLGIDG HIGEMLLNHT
LGKIASTYIH TQAMEQRKLA LEKWHAWLDR IGFAAIHGLK EALFEIPQKS PQANGGEASG
DLSELVFSED SK
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