Gene PP_3832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3832 
Symbol 
ID1046733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4357906 
End bp4358103 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content52% 
IMG OID637147240 
Productcarbon storage regulator 
Protein accessionNP_745962 
Protein GI26990537 
COG category[T] Signal transduction mechanisms 
COG ID[COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) 
TIGRFAM ID[TIGR00202] carbon storage regulator (csrA) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATAC TCACCCGTAA GGTTGGCGAA AGCATCGTCA TCAACGATGA CATCAAAGTC 
ACCATTCTGG GCGTCAAAGG GATGCAGGTG AGGATCGGTA TCGATGCACC GAAAGATGTT
CAGGTCCATC GAGAAGAGAT TTTCAAACGC ATCCAGGCCG GCAGCCCGGC TCCGGAGAAA
CACGAAGACA CACACTGA
 
Protein sequence
MLILTRKVGE SIVINDDIKV TILGVKGMQV RIGIDAPKDV QVHREEIFKR IQAGSPAPEK 
HEDTH