Gene PP_3823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3823 
Symbol 
ID1046742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4351094 
End bp4351747 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content67% 
IMG OID637147231 
Productcytochrome c-type protein 
Protein accessionNP_745953 
Protein GI26990528 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.479711 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATGACAC CGTTGAGACG CGTGATGATC GGCAGCTTGC TGATCCTGGC CTGGCCCGCG 
GCACATGCCG CCGACGGTCA GAAGGTCTTC ACCCAGGGGG GGGCCAACCC CGCCGCCATG
GCCTGCCTGG GTTGCCACGG CCCGGACGGC AATGGCATTG CGGCTGCCGG CTTTCCACGT
TTGGCCGGGC TACCGGCCGG TTATCTTGCC AAGCAGTTGC AGGACTGGCG CAACGGCAGC
CGCAAGCAGC CAGTGATGGA ACCTTTGGCC AAGGCCCTGA GCGACGACGA AATCAAGGCC
GTCAGTACCT ACCTGGCCAG CCTGCCGGCA GTGCCCGCTG GCGACCTGCA CCGCCAGCAG
ATTGCCGATG ACCCGACTAC CCGCATGGCC CTGTACGGCG ACTGGAGCCG GCAGATTCCT
GGTTGCGTGC AATGCCACGG GCCGGGTGGC GGCGGGGTGG GCGAACACTT CCCACCCTTG
GCCGGCCAGC CCGCCAGTTA CCTGGTGGCA CAGCTCAATG CCTGGCGCGA CGGCAGCCGC
AGCAATGACC CCAACCAGCT GATGGTCGGC GTGGCCAAGG CCATGACCGA TGAGGAGATC
AAGGCCGTTG CCGAGTTCTT CGCCCGCCCC GCCAGCCAGG AGGTCACGCC ATGA
 
Protein sequence
MMTPLRRVMI GSLLILAWPA AHAADGQKVF TQGGANPAAM ACLGCHGPDG NGIAAAGFPR 
LAGLPAGYLA KQLQDWRNGS RKQPVMEPLA KALSDDEIKA VSTYLASLPA VPAGDLHRQQ
IADDPTTRMA LYGDWSRQIP GCVQCHGPGG GGVGEHFPPL AGQPASYLVA QLNAWRDGSR
SNDPNQLMVG VAKAMTDEEI KAVAEFFARP ASQEVTP