Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3823 |
Symbol | |
ID | 1046742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4351094 |
End bp | 4351747 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637147231 |
Product | cytochrome c-type protein |
Protein accession | NP_745953 |
Protein GI | 26990528 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.479711 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATGACAC CGTTGAGACG CGTGATGATC GGCAGCTTGC TGATCCTGGC CTGGCCCGCG GCACATGCCG CCGACGGTCA GAAGGTCTTC ACCCAGGGGG GGGCCAACCC CGCCGCCATG GCCTGCCTGG GTTGCCACGG CCCGGACGGC AATGGCATTG CGGCTGCCGG CTTTCCACGT TTGGCCGGGC TACCGGCCGG TTATCTTGCC AAGCAGTTGC AGGACTGGCG CAACGGCAGC CGCAAGCAGC CAGTGATGGA ACCTTTGGCC AAGGCCCTGA GCGACGACGA AATCAAGGCC GTCAGTACCT ACCTGGCCAG CCTGCCGGCA GTGCCCGCTG GCGACCTGCA CCGCCAGCAG ATTGCCGATG ACCCGACTAC CCGCATGGCC CTGTACGGCG ACTGGAGCCG GCAGATTCCT GGTTGCGTGC AATGCCACGG GCCGGGTGGC GGCGGGGTGG GCGAACACTT CCCACCCTTG GCCGGCCAGC CCGCCAGTTA CCTGGTGGCA CAGCTCAATG CCTGGCGCGA CGGCAGCCGC AGCAATGACC CCAACCAGCT GATGGTCGGC GTGGCCAAGG CCATGACCGA TGAGGAGATC AAGGCCGTTG CCGAGTTCTT CGCCCGCCCC GCCAGCCAGG AGGTCACGCC ATGA
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Protein sequence | MMTPLRRVMI GSLLILAWPA AHAADGQKVF TQGGANPAAM ACLGCHGPDG NGIAAAGFPR LAGLPAGYLA KQLQDWRNGS RKQPVMEPLA KALSDDEIKA VSTYLASLPA VPAGDLHRQQ IADDPTTRMA LYGDWSRQIP GCVQCHGPGG GGVGEHFPPL AGQPASYLVA QLNAWRDGSR SNDPNQLMVG VAKAMTDEEI KAVAEFFARP ASQEVTP
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