Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3764 |
Symbol | |
ID | 1046441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 4294069 |
End bp | 4295370 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637147172 |
Product | outer membrane porin |
Protein accession | NP_745894 |
Protein GI | 26990469 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.522082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.130801 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTCCTC GCATGTTTTC CCCTTTCCCC CTCGCCCCCG GGCGCCGTGT TACCGGCCTG TTTCTATTGT GTGCCGGTGT CAACGCCCAG GCTGCCGGGT TTCTTGAAGA CGCCAGTGCC AAGATCGAAG CACGCAATGT CTATTTCAAC CGCGACTTCC GGGACGGTTA CAGCAGTTCC AGCCAGGGCG CATCCAAGCG CGAAGAGTGG GCACAAGGCT TCATCCTCAA TGTGCAATCG GGTTATACGC AAGGCCCGGT AGGTGTTGGT GTGGATGCGC TGGGCATGTT CGGCTTCAAA CTGGATTCCA GCCCGGCCGA CAGCAACAGT GGATTGCTGC CCTCGTCTGG CCACGACCCC CGGCGCTCGG CCGACCAGTA TGCGAAGATG GGCCTGGCGG CCAAGGTCAA GGTGTCCAAT ACCGTGCTCA AGTACGGTTC GATGATGCCG GATGTGCCGT TGCTCAAGTA CAACGATGGC CGTCTGCTGC CGACCCTGTT CCATGGGGCC ATGCTCACCT CTGAAGAACT GCACGACCTG AAGTTCACCC TGGCTCGCCT GGACAAATAC ACCGCTCGGG ATTCCACCGA CCGCCAGGAC ATCCGCGTGC ACTGCAAGAA CAAGCGTTAT GCCTGCGATA CCGAAGCCGA CCACTTCGAC CTGGCCGGTG TCGACTACCG TTTCAACGAG CGTTTCAGCG CCCAGTACCA AGTGGCCAAG CTGGAGAATA TCTACCGCCA GCACTTCCTC GGCCTGGTGG CCAGTCAGCC GCTGCCGGTG GGCAGCCTGT CGGCTGACAT GCGCCTGATC AAGAGTGATG ACATCGGCAA TGCCCGTGCG GGCGAAATCG ACCATCGCGC CTTCAGCGGC ATGCTTGGCT ACAGCCTCGG TGGCCACAAG CTCAGCGCCG GCTGGCAGCG CATGTATGGC AACAGTGCCA TGCCGTACCT GGATGGCAGC AACCCGTACT TGGTCAACTA CGCCCAGGTC AATGATTTTG CCGCTGCACA GGAGCGCTCC TGGCAAGTGC GCTATGACTA CGACTTCAAG GCGCTGGGTG TACCCGGCCT GACCTTCTTC ACCCGTTATA TCAACGGCGA CAATATCAAG GTGCCGGGTA GCAGTGTCGA AGGCAAGGAG TGGGAACGCG ACACCGAGTT CAAATACCAG GTGCAAAGTG GCACCTTCAA GGATGTCAGC GTACGCCTGC GTAATTCCAC TTACCGCAGC AACTATGAAC GGTGGGCGCG TGACATGGAT GAGACGCGGG TCATTGTCAG CTACAACTTC TCGATCTTCT AA
|
Protein sequence | MFPRMFSPFP LAPGRRVTGL FLLCAGVNAQ AAGFLEDASA KIEARNVYFN RDFRDGYSSS SQGASKREEW AQGFILNVQS GYTQGPVGVG VDALGMFGFK LDSSPADSNS GLLPSSGHDP RRSADQYAKM GLAAKVKVSN TVLKYGSMMP DVPLLKYNDG RLLPTLFHGA MLTSEELHDL KFTLARLDKY TARDSTDRQD IRVHCKNKRY ACDTEADHFD LAGVDYRFNE RFSAQYQVAK LENIYRQHFL GLVASQPLPV GSLSADMRLI KSDDIGNARA GEIDHRAFSG MLGYSLGGHK LSAGWQRMYG NSAMPYLDGS NPYLVNYAQV NDFAAAQERS WQVRYDYDFK ALGVPGLTFF TRYINGDNIK VPGSSVEGKE WERDTEFKYQ VQSGTFKDVS VRLRNSTYRS NYERWARDMD ETRVIVSYNF SIF
|
| |