Gene PP_3725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3725 
Symbol 
ID1045373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4250041 
End bp4251201 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content64% 
IMG OID637147135 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionNP_745857 
Protein GI26990432 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCC AACTGACCCA AGAACAAGAA ATGTTGGTGG AAGCGGTACG CAGCTTTGTT 
GCCAAGGAGC TGCTGCCCCA TGAGGAAGCG GTGGACCGCG CCGACGCCGT GTCACCCGAA
CTGGCCGCGC AGATCCGTGG CAAGGCCATC GCTGCCGGGT TCTATGCCTT CAACATGCCC
GAGGAAGTGG GAGGGGGCGG CCTGGACTAC CTGTCCCAGG CGCTGATCGA ACGTGAGCTG
TCCAAGGTGT CCTGGGCGCT GCATGTCTTC GTTGCACGGC CGTCGAAAAT CCTCATGGCC
TGCAAGGACG AACAGATCAA CGACTACCTG CTGCCGTGCG TGCAGGGCGA GAAGGTCGAC
TGCTTCGCCC TCACCGAACC GGGCGCCGGC TCTGATGCCA ACGCCATCAA GACCCGCGCC
GTGCGCCAGG GCGATGACTT TGTCATCAAC GGCAGCAAGC ACTTCATCAG CCACGCCGGC
CACGCCGATT TCGCCATTGT CTTCGCTGTC ACCGACACCT ACGAGCACAA CGGGCGCAAG
CGCAATGCGG TCACCGCCTT GCTGGTCGAC CGGGGTACGC CGGGCATGAC CATCCGCCGT
GGTCCCAAGT GCGTGAGCAA CCGTGGTTAT CACACCTACG AGCTGTTCTT CGACGACTGC
CGGGTGCCGG CCAGCAAGGT GCTGGGCGAA GTGGGCAAGG GCTGGGAAGT GGCCAACGCC
TGGCTTACCG CCGGCCGGGT GATGGTCGCC GCCAACTGCG TGGGCCAGGC CCAGCGCGCC
CTCGACCTGT CGCTGCAATG GGCCGCCGAC CGCAAGCAGT TCGGCCAGGC CATCGGCAGC
TATCAGGGGG TGTCGTTCAA GCTGGCCGAT ATGGCCACGC AGATCCGCGC GGCCGAGATG
CTCACCCTGC ACACCGCCTG GAAGATGGAC CAGGGCAACA TGACCGACGG TGAGGCCGGC
ATGGCCAAGC TGTTTGCCAG CGAGGTGCTG GGCAAGGTCG CCGACGAAGC GGTGCAGATC
TTCGGTGGCA TGGGCCTGAT GGATGAAGGG CCGGTTGAGC GCATCTGGCG CAACGCGCGT
ATCGAGCGCA TCTGGGAGGG CACTTCGGAA ATCCAGCGGC ATATCATCGC CCGCGAACTG
CTGCGCCCGC TGCTGCGCTG A
 
Protein sequence
MNFQLTQEQE MLVEAVRSFV AKELLPHEEA VDRADAVSPE LAAQIRGKAI AAGFYAFNMP 
EEVGGGGLDY LSQALIEREL SKVSWALHVF VARPSKILMA CKDEQINDYL LPCVQGEKVD
CFALTEPGAG SDANAIKTRA VRQGDDFVIN GSKHFISHAG HADFAIVFAV TDTYEHNGRK
RNAVTALLVD RGTPGMTIRR GPKCVSNRGY HTYELFFDDC RVPASKVLGE VGKGWEVANA
WLTAGRVMVA ANCVGQAQRA LDLSLQWAAD RKQFGQAIGS YQGVSFKLAD MATQIRAAEM
LTLHTAWKMD QGNMTDGEAG MAKLFASEVL GKVADEAVQI FGGMGLMDEG PVERIWRNAR
IERIWEGTSE IQRHIIAREL LRPLLR