Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3623 |
Symbol | |
ID | 1046487 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4119581 |
End bp | 4120924 |
Gene Length | 1344 bp |
Protein Length | 447 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637147037 |
Product | gluconate 2-dehydrogenase acceptor subunit |
Protein accession | NP_745759 |
Protein GI | 26990334 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCATC GTTTCGCAAG AACCGCTGGC TGGCTGGCGC TGCCGTGCCT GGTCGCGGCG GGCCTGCTGG CCTGGTATGT CACCCGTGAA CCCGCATCGC CGTTTGCCGA CGCACAGGCC ACTGCTGCCG ACCCGGCGCT GGTCAGCCGC GGCGAATACG TCGCCCGGCT CAGTGACTGC GTGGCCTGCC ATAGCCTGCC GGGTGGCAAA CCGTTCGCCG GCGGACTGGA AATGGCCACC CCGCTGGGGG CAATCCACGC CACCAACATC ACCCCCGACC GCGACAGCGG CATCGGTAAC TACACCCTGG CCGACTTCGA CCGCGCCGTG CGCCAGGGTG TCGCGCCGGG TGGCCGACGG CTGTACCCGG CGATGCCTTA CCCGTCCTAC GCCAAGCTCA GCGATGATGA TGTCAAGGCG CTGTATGCGT TCTTCATGCA CGGCGTGCAA CCGGCGCGGC AGGCCAACCT GGGCAGCGAC ATCCCCTGGC CGCTGAACCT GCGCTGGCCC ATCGCCTTGT GGAACGGCCT GTTCGCCGCC ACTACGCCTT ACACCGACAA GGCCGGGCAG GATGCACAGT GGAACCGTGG CGCCTATATC GTCCAGGGCC CCGGACACTG CGGCAGTTGC CATACGCCAC GTGGCCTGGC CTTCAATGAA AAGGCGCTGG ATGACAGCGG CAAGCCGTTC CTGTCCGGCG CACTGCTCGA CGGCTGGTAT GCACCCAGCC TACGCGCCGA TCACAACACC GGGCTGGGGC GCTGGAGCGA GGCAGAGATC GCGCAGTTCC TGAAGACCGG GCGCAACCGG CATGCAGTGG TATATGGTTC GATGACCGAG GCGTTCAACA ACTCCACGCA ATTCATGCAT GATGACGACC TGGCTGCCAT CGCTCACTAC CTGAAGTCGC TGCCCGGCGA CCCCCAACGG GACGGCGCGC CATGGCATTA CCAGGCCGAA TCGCTAGCGA CACGGCTGGA CAGCCCGGGA GCGCGCACCT ACGTGACACG CTGTGCGTCG TGCCATGGCC TGGACGGCAA GGGCCAGGCC GAATGGATGC CGCCCTTGGC CGGGGCGACC TCGGCACTGG CCAAGGAGAG CGCCTCGGCA ATCAATATCA CGCTCAATGG TTCGCAGCGG GTGGTGGCTG CAGGGGTGCC GGACGCCTAT CGCATGCCGG CTTTGCGCGA GCAGTTGAGT GATCAGGAGA TTGCCGACGT GCTCAGCTTT GTGCGTACGG CCTGGGGCAA CCAGGGGGGT GCGGTGGATG CGCAGGCGGT AGGCAAGCTG CGTGGGCATA CCGACCCGGC CAGCAGCAGC CCTATCATCT TGCATATGCG TTGA
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Protein sequence | MTHRFARTAG WLALPCLVAA GLLAWYVTRE PASPFADAQA TAADPALVSR GEYVARLSDC VACHSLPGGK PFAGGLEMAT PLGAIHATNI TPDRDSGIGN YTLADFDRAV RQGVAPGGRR LYPAMPYPSY AKLSDDDVKA LYAFFMHGVQ PARQANLGSD IPWPLNLRWP IALWNGLFAA TTPYTDKAGQ DAQWNRGAYI VQGPGHCGSC HTPRGLAFNE KALDDSGKPF LSGALLDGWY APSLRADHNT GLGRWSEAEI AQFLKTGRNR HAVVYGSMTE AFNNSTQFMH DDDLAAIAHY LKSLPGDPQR DGAPWHYQAE SLATRLDSPG ARTYVTRCAS CHGLDGKGQA EWMPPLAGAT SALAKESASA INITLNGSQR VVAAGVPDAY RMPALREQLS DQEIADVLSF VRTAWGNQGG AVDAQAVGKL RGHTDPASSS PIILHMR
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