Gene PP_3619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3619 
Symbol 
ID1046286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp4113353 
End bp4114249 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content51% 
IMG OID637147033 
Producthypothetical protein 
Protein accessionNP_745755 
Protein GI26990330 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00105207 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGAG GTAGCGCCGT GGCCACAACA TGGTTATTTA GCCCACATGA AAACACTTAT 
ATTAAACCAA AAATCCACGG ACAAATCAGC AAAATAACCA CAACATTAGC GCAGCTTAGA
AATCCATGGG TTTCCGACTC AGCCTTCATG GCCAAGATGT ATACCGCCAC GATTTTAGCC
ATCGCGATTG TATCCTACAC AGGCTTTTTC ACCCACTCAA TCAATTACCA ACAGGAAGGG
GCATATGTAT TTATTGCAAT ACAGCTCCTC GGACCATTTA TTTTTACTCC ATTCTTAGCC
TACCGTGTTT TCTTAATAAA AAAACTCTCT GACATATACC TCAATAGAGC CACCAAAAAA
ATATATTACA AACGCATAAA TACACTCATA GTTATTGATT GGAATAACAC TGGAGGCGGT
ATTTTCAAAC GCACAGAATT CGGCGGCTCC TACTTCACCA CCAGCTATGC CCTCGCCTTC
GCCCCCCGCC GGGAAGACGG CAGCCTGCAC CAAAAAGACT GCCTGTGGGT GGACAGCAAC
GAACCCACCG AACCCGGCGT CAAGCATGTC GCCGAAGTGT GGGAATACCT GCGCCACTTC
ATGGACCACG GCCCGGACAA ACTCCCCCCG CCCGGTGAAC CCAACTGGTG GCACAAGCCA
CTTCACGCCA TCTGCCTGAC CCCGGCAGAA GCCTGGCGCC ACTATGCCCC CTGGCGAACC
GGCGAGCCCG GTGAAATGCA GGGCAAAAAG AACTGGCAAT TGCCGTTCTG GGCAGTGCTG
TTCCCCTACA ACCTGACCGT CGCTCTCTGT TGGTACTGTG TCTGCAAGCT TTTCAATGTC
CGTGCAGCGC CACCACCGGC GGAGGCTTTC GAAAGTGGGC CTGCTAAGCC CGAATAG
 
Protein sequence
MSRGSAVATT WLFSPHENTY IKPKIHGQIS KITTTLAQLR NPWVSDSAFM AKMYTATILA 
IAIVSYTGFF THSINYQQEG AYVFIAIQLL GPFIFTPFLA YRVFLIKKLS DIYLNRATKK
IYYKRINTLI VIDWNNTGGG IFKRTEFGGS YFTTSYALAF APRREDGSLH QKDCLWVDSN
EPTEPGVKHV AEVWEYLRHF MDHGPDKLPP PGEPNWWHKP LHAICLTPAE AWRHYAPWRT
GEPGEMQGKK NWQLPFWAVL FPYNLTVALC WYCVCKLFNV RAAPPPAEAF ESGPAKPE