| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3587 |
|---|
| Symbol | tpx |
|---|
| ID | 1046360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 4075851 |
|---|
| End bp | 4076351 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637147001 |
|---|
| Product | redoxin domain protein |
|---|
| Protein accession | NP_745723 |
|---|
| Protein GI | 26990298 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2077] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTCAAG TGACTCTCAA AGGCAACCCG GTCCAGGTCA ACGGCAACCT GCCACAGGCC
GGCGCCCAGG CTCCGGCTTT CTCCCTGGTA GGTGAAGGCC TGGCTGACAA GTCGCTGAAA
GACTACGCCG GCAAGCGCAA GGTGCTGAAT ATCTTCCCAA GCGTCGATAC CCCGACCTGC
GCCACCTCGG TGCGCAAGTT CAACGCCCAG GCCAACGACG TTGCCAACAC CGTGGTGCTG
TGCATCTCGG CTGACCTGCC GTTCGCCCAG GCACGTTTCT GCGGCGCCGA AGGGCTGGAC
AATGTGAAGA ACCTGTCGAC CCTGCGTGGC CGCGAGTTCC TCGAGAACTA CGGCGTAGCC
ATCGCCGACG GCCCGCTGGC CGGCCTGGCC GCCCGCGCCG TGGTGGTGCT GGACGAGAAC
GACAAGGTGC TGCACAGCGA ACTGGTTGGC GAAATTGCTG ACGAGCCGAA CTACGAGGCG
GCGCTGGCTG TACTGAAGTA A
|
|---|
| Protein sequence | MAQVTLKGNP VQVNGNLPQA GAQAPAFSLV GEGLADKSLK DYAGKRKVLN IFPSVDTPTC
ATSVRKFNAQ ANDVANTVVL CISADLPFAQ ARFCGAEGLD NVKNLSTLRG REFLENYGVA
IADGPLAGLA ARAVVVLDEN DKVLHSELVG EIADEPNYEA ALAVLK
|
|---|
| |