| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3548 |
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| Symbol | |
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| ID | 1045281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 4022970 |
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| End bp | 4024505 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637146963 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | NP_745685 |
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| Protein GI | 26990260 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.481697 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA ACGCCGCTGC CCAGTTCACG CCGCCGAGTC TGCTGCTGAC CACCATCGGC
CTGTCGCTCG CGACGTTCAT GCAGGTGCTG GACACCACCA TCGCCAACGT AGCCCTGCCG
ACCATTTCCG GCAACCTGGG GGTGAGCTAC GAGCAAGGCA CTTGGGTCAT CACCTCGTTC
GCGGTCAGCA ACGCTATCGC CTTGCCGCTG ACCGGCTGGC TGAGCCGGCG CTTTGGTGAA
GTGAAGCTGT TCATCTGGGC CACGCTGCTG TTCGTGCTGG CGTCGTTCCT GTGCGGTATT
GCCCAGTCGA TGCCCGAGCT GGTGGGCTTT CGTGTCTTGC AGGGCGTGGT CGCCGGACCG
CTTTATCCGA TGACCCAGAC CCTGCTGATT GCTGTCTACC CCCCGGCAAA ACGGGGGATG
GCACTGGCGC TGCTGGCGAT GGTCACGGTG GTGGCGCCGA TTGCCGGGCC GATTCTTGGG
GGCTGGATTA CCGATAGCTA CAGCTGGCCA TGGATCTTCT TCATCAATGT GCCCATCGGG
CTGTTCGCTG CTGCCGTGGT GCGCCAGCAG ATGCGCACGC GCCCGGTGGT CACCAGCCGC
CAGCCGATGG ATTACATTGG CCTGCTGACC CTGATTATCG GCGTCGGTGC CTTGCAGGTA
GTGCTGGACA AGGGCAACGA TCTGGACTGG TTCGAATCGT CGTTCATCAT TGTCGGCAGC
CTGATTTCGG TGGTGTTCCT GGCGGTGTTC GTGATCTGGG AGCTGACCGA CCGGCACCCG
GTGGTCAACT TGCGCCTGTT TGTGCACCGC AACTTCCGCA TTGGCACCAT TGTGCTGGTC
GGGGGCTATG CCGGGTTCTT CGGTATCAAC CTGATCCTGC CGCAGTGGTT GCAGACGCAG
ATGGGCTATA CCGCGACCTG GGCAGGCCTG GCGGTGGCGC CGATCGGTTT GCTGCCGGTG
ATCATGTCGC CGTTCGTGGG CAAATATGCG CACCGGTTCG ACTTGCGGGT GCTGGCTGGG
TTGGCGTTCC TGGCGATCGG CACCAGTTGC TACATGCGTG CCGGTTTCAC CAGCGAGGTG
GACTTCCAGC ACGTGGCCTT GGTGCAGTTG TTCATGGGGA TTGGCGTGGC GTTGTTCTTC
ATGCCGACCT TGAGCATTCT GCTGTCCGAT CTGCCGCCGC ACCAGATTGC CGACGGTTCG
GGGCTGGCGA CTTTTCTGCG AACCTTGGGC GGGAGTTTTG CGGCTTCGTT GACCACTTGG
ATCTGGATTC GTCGGGCGGA TCAGCACCAT GCCTACCTGA GCGAGCACAT CAGCCAGTTC
GACCCGACGA CGCGGCATAC CCTTGAGCAG TTGGGCGGGG CCAGCCCGCA GAGTTATGCG
CAGCTGGAGC AGATACTCAA CGGGCAGGCT TACATGATGT CGACGGTGGA TTACTTCACC
TTGATGAGCT GGGTGTTTGC CGGGTTGATT CTGCTGGTGT GGTTCGCCAA GCCGCCCTTT
ACCGCTAAGG CGGGCCCGGC ATCGGCGGGG CATTGA
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| Protein sequence | MSNNAAAQFT PPSLLLTTIG LSLATFMQVL DTTIANVALP TISGNLGVSY EQGTWVITSF
AVSNAIALPL TGWLSRRFGE VKLFIWATLL FVLASFLCGI AQSMPELVGF RVLQGVVAGP
LYPMTQTLLI AVYPPAKRGM ALALLAMVTV VAPIAGPILG GWITDSYSWP WIFFINVPIG
LFAAAVVRQQ MRTRPVVTSR QPMDYIGLLT LIIGVGALQV VLDKGNDLDW FESSFIIVGS
LISVVFLAVF VIWELTDRHP VVNLRLFVHR NFRIGTIVLV GGYAGFFGIN LILPQWLQTQ
MGYTATWAGL AVAPIGLLPV IMSPFVGKYA HRFDLRVLAG LAFLAIGTSC YMRAGFTSEV
DFQHVALVQL FMGIGVALFF MPTLSILLSD LPPHQIADGS GLATFLRTLG GSFAASLTTW
IWIRRADQHH AYLSEHISQF DPTTRHTLEQ LGGASPQSYA QLEQILNGQA YMMSTVDYFT
LMSWVFAGLI LLVWFAKPPF TAKAGPASAG H
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