Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3544 |
Symbol | |
ID | 1045565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 4016096 |
End bp | 4017505 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637146959 |
Product | GntR family transcriptional regulator |
Protein accession | NP_745681 |
Protein GI | 26990256 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.384624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.66471 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCT ACGAACGCTT CGCCGATGAC ATTGCCGAAC TGATCCGCTC CGGGGTGCTG GGCCCCGGCC AGCGCGTGCC GTCCGTGCGC TACGCCAGCC AGACCCACGG GGTCAGCCCG TCTACCGTGT TCCAGGCCTA TTACCTGCTG GAACGGCGCG GGCTGATCCG CGCCCGGCCG CGCTCCGGGT ATTTCGTCAA CGCCCACGTT CCGCGTCAGT TCAGCGAGCC GCAGGCGCTG CAGCCGGTGA GCGAGTCTAC CGATGTCGAC GTCAGCGCCT TGGTATTTTC GATCCTCGAC TCGATCAAGG ACCCCAACAC CATTGCCTTC GGCTCAGCCT TTCCCAGCCC TGAACTGTTC CCGCTGCAAC GCCTGTCCCG CTCACTGGCC AGTGCCAGCC GCAGCATGGA CCCGCGCATG GTGGTGACCG ATCTGTCCCC CGGTAACCCG CAGTTGCGCC GGCAGATAGC CCTGCGCTAC ATGGTCGGTG GGCTGATGCT GCCGATGGAA GAGCTGCTGA TCACCAACGG CGCACTGGAG GCCCTGAACC TGTGCCTGCA GGCAGTGACC CAGCCGGGCG ATCTGGTCGC CATCGAGGCC CCGGCCTTCT ATGCCTGCCT GCAGGTGCTG GAGCGGCTCA AGCTCAAGGC TGTGGAAATC CCCGTGCACC CGCGCGAGGG CATGGACCTG GGGGTGCTGG CGCAGACCCT GGAAATGCAC CCGGTAAAGG CCGTGTGGTG CATGACCAAT TTCCAGAACC CGGTGGGTGC AAGCATGCCG GAGGCCAAGA AACAGGCCAT GGTGGAGTTG CTGGCGCGCC ATCAGGTGCC GTTGATCGAA GACGACGTGT ACGCCGAGCT GTACTACTCG CAACAGGCGC CCAAACCCGC CAAGGCCTTC GACACTCAGG GCCTGGTCAT GCACTGCGGC TCGTTCGCCA AAAGCCTGGC ACCGGGCTAT CGCATTGGCT GGGTGGCCGC CGGGCGCTTT GCGCAAAAGA TCGAGCGGTT GAAACTGATG ACCTCCCTTT GTGCTTCCAT GCCGGCCCAG GCGGCCATCG CCGACTACCT GCAACACGGC GGCTACGACC GCCACCTGCG CAAGCTGCGC TACGCGCTGG AGGGCCAGCA GGCCAACATG CTGGCAGCCA TCGCCCGCCA CTTCCCGGCG CAGACACGGG TCAGCCAGCC TTCCGGCGGC TACTTCCTGT GGCTGGAACT GCCCGAGCAG ATGGACGCCC TCAAGCTGTT CCACATGGCC CTGGCCCAAG GCATCAGCAT CGCGCCCGGG CCGATCTTTT CGCCCACCCG ACGCTTCGGC AATTGCATCC GCCTGAACTA CGGCAGCCCC TGGCATGACG GCGCCGAACA GGCCATGGAA ACCCTCGGGC GGATCATTCG CTCGTTCTGA
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Protein sequence | MKRYERFADD IAELIRSGVL GPGQRVPSVR YASQTHGVSP STVFQAYYLL ERRGLIRARP RSGYFVNAHV PRQFSEPQAL QPVSESTDVD VSALVFSILD SIKDPNTIAF GSAFPSPELF PLQRLSRSLA SASRSMDPRM VVTDLSPGNP QLRRQIALRY MVGGLMLPME ELLITNGALE ALNLCLQAVT QPGDLVAIEA PAFYACLQVL ERLKLKAVEI PVHPREGMDL GVLAQTLEMH PVKAVWCMTN FQNPVGASMP EAKKQAMVEL LARHQVPLIE DDVYAELYYS QQAPKPAKAF DTQGLVMHCG SFAKSLAPGY RIGWVAAGRF AQKIERLKLM TSLCASMPAQ AAIADYLQHG GYDRHLRKLR YALEGQQANM LAAIARHFPA QTRVSQPSGG YFLWLELPEQ MDALKLFHMA LAQGISIAPG PIFSPTRRFG NCIRLNYGSP WHDGAEQAME TLGRIIRSF
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