| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3527 |
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| Symbol | |
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| ID | 1046509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3998358 |
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| End bp | 3999041 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637146942 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | NP_745664 |
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| Protein GI | 26990239 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0655225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.540257 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGATT CCGTAGTCGG CCTCGGCCAG CCTGAAACCG AAGGGGGGCG CAAAACGCGC
AAGAACAACC CTGAGAAAAC ACGCGAGGAC ATCCTCCAGG CCGCCATCAA CGAGTTCGTT
CAGCAAGGGC TGGCCGGCGC CCGCGTCGAC GCCATCGCCG AACGCACCGC CACTTCCAAG
CGCATGATCT ACTACTACTT CGGCAGCAAG GAGCAGCTGT ATTGCGAGTG CCTGGTGAAG
TTGTACGGGG ATATCCGCAA GACCGAACAG AGCCTGGACC TGGAGTCGTT ACCGGCTGAG
CAGGCGATCC GCCGCCTGGT GGAGTTCACC TTCGATCACC ATGACCGCAA CGTCGATTTC
GTGCGCATCA TCTGCACCGA AAACATCCAC TATGGCGAGT ACGTCAAGCA GTCGCCGGCC
ATTCGCGAAA TGAGCAGCCT GGTGCTGGAG GCCTTGGGCA ACACCCTGCG CCGTGGCGTT
CAGGAAGGCG TGTTCCGCGC CGGCATCGAG GTCATCGACC TGCACATGCT GATGAGCTCG
TTCTGCTTCT ACCGAGTGTC GAACCGCCAT ACCTTTGGCG AGATCTTCCA GATCGACCTG
TCTGATGAGC AAATAAAGCT GCGCCACAAA GCCATGATCT GTGATGCGGT GTTGCGGTAC
ATCCAGCTCG AGCCTCGTAC CTGA
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| Protein sequence | MSDSVVGLGQ PETEGGRKTR KNNPEKTRED ILQAAINEFV QQGLAGARVD AIAERTATSK
RMIYYYFGSK EQLYCECLVK LYGDIRKTEQ SLDLESLPAE QAIRRLVEFT FDHHDRNVDF
VRIICTENIH YGEYVKQSPA IREMSSLVLE ALGNTLRRGV QEGVFRAGIE VIDLHMLMSS
FCFYRVSNRH TFGEIFQIDL SDEQIKLRHK AMICDAVLRY IQLEPRT
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