| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3467 |
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| Symbol | |
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| ID | 1045526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3933499 |
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| End bp | 3935409 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637146883 |
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| Product | GAF modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | NP_745605 |
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| Protein GI | 26990180 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGAC AACTTATAAC AAACGCCCAC GACCCGCTGC ACGAATCCCG CGAGGCCCGC
CTGAAGCTGG CCAGCGAAGG CGAACTACCG CTAGGGATGC TGCGCGACGA GATCGACGCC
TCCTGGCGCC GCAGCCTGGG CCACGGCCTG GACTGCCTGC AGGGCGAACA GGTCGGCCTG
GGCCTGGAAC AGGGCCATGA CCTGCGCCTG CTGCTGGAGC GCAACCGCCT GCTGATCGAT
GCCGTTACCC CCGAACTCGA CTACCTGGTC GCGCGCCAGG GCAAGGCTGG CATCGTCATC
CTCGGCGATG CCCAGGCCAA CGTGCTGGCC ATCGAAGGCC AGAAGCACGT GCTGCAACGC
GAAGGCCTGC GCGATCTGCA CCCGGGCAGT TGCTGGAGCG AATCGCTGCG CGGCACCAAT
GCCATCGGCA CGGCCGTGGT CGAAGGCCGG CCGACGCTGA TCAACTGCGG CGAACATTAC
CTCGACCGCC TCAGCCCGTT CTCCTGCACA TCCGTCCCGC TGCGCGACCC GCGCGGCGAG
GTGATCGGCG TGCTCGACAT CACCCGCGAA GGGGTGATGG CGCAACCGCA GGACAGCCTG
TCGACCCTGA TGCTGGCGGC GGGCAACATT GAAAGCCGCC TGTTTGGCCT GTGCCACCCG
GACCAGTTGG TGCTGGCCTT CCACAGCCGC CCGCAGTACC TCAACAGTGC CTGGCACGGC
CTGTTGGCCC TGAGCCTGGA CGGCGAAGTG CTGGCTGCCA ACGACGGTGC CTGCCAGCTG
TTGCAGGTGC CGCGTCACGA ACTGATTGGG CGGCGTAGCA CCGACCTGCT GGGCGAACGT
TCCCCGGCCT TTATCGCTCG CCTGTGGCAG GGCGGGGTCA GCAGCGTGCA GACCGCCAAG
GGCGAGTTCT ATTTCCGTGC CCTACAGCTG CCGCGCCATG GCCGGGTAAC CCCCAGCACA
CCATCCAGCA AGCCGGCCTT GAGCAAACAG TCGCCTGCAC TCGATGCTCT GGCCGGAGGT
GATCAACGCC TGGCGCGCAA CCTGCGCATG GCTCGCCAGG GGCTGGGCAA TGGTTTGCCA
GTGCTGCTGC TGGGCGAAAC CGGTACCGGC AAGGAAGTGG TCGCTCGGGC CTTGCACCAG
GCCAGCCCGC GTGCCGACAA ACCGTTTGTG GCGGTCAACT GCGCGGCCAT TCCCGAAGGG
CTGATCGAGT CCGAGCTGTT CGGCTACCGT GAGGGCGCCT TCACCGGTTC GCGCCGGGGC
GGCATGGTCG GGCGGCTGAT GCAGGCCCAT GGTGGCACGC TGTTCCTCGA CGAAATCGGC
GACATGCCGC TCGCCCTGCA AGCACGCCTG TTGCGGGTAC TGCAGGAGCG CCGCGTAGCA
CCCTTGGGGG CGGGTGACGA GCAGGACATC GACGTGGCGC TGATCTGCGC CACCCACCGC
GACCTCAAGC GCCTGGTGCA GGAGCAGCAC TTCCGTGAAG ACCTGTTCTA CCGGGTCAAC
GGTGTGTCGC TGCGCCTGCC GGCCCTGCGT GAACGCGACG ACCTGGCGGC GATCATCCAG
GGCCTGCTGG ACAAGGCCGA TGCGCGTGGC GTAACCCTCG ACCCGGCGTT GACCGCGTTG
CTCGAAGGCT TCGACTGGCC CGGCAACATC CGTCAGCTGG AAATGGTGGT ACGCACCGCG
CTGGCCATGC GCGAGGATGG CGAGCAGGTG CTGACCCTTG ATCACCTTAC TGACTGCCTG
CTGGACGAAC TGGCCAGCAG CGCAGCGCCC TCCGGCAGCC TCAAGGACAG TGAACTGGAA
CAGATCCGCG GTGCTCTGGC GCGCCATCAG GGCAACGTCT CGGCCGCCGC CGCGGCACTG
GGTATCAGCC GGGCGACGCT GTACCGCAAG CTCAAGCAGT TGCGCGGCTG A
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| Protein sequence | MARQLITNAH DPLHESREAR LKLASEGELP LGMLRDEIDA SWRRSLGHGL DCLQGEQVGL
GLEQGHDLRL LLERNRLLID AVTPELDYLV ARQGKAGIVI LGDAQANVLA IEGQKHVLQR
EGLRDLHPGS CWSESLRGTN AIGTAVVEGR PTLINCGEHY LDRLSPFSCT SVPLRDPRGE
VIGVLDITRE GVMAQPQDSL STLMLAAGNI ESRLFGLCHP DQLVLAFHSR PQYLNSAWHG
LLALSLDGEV LAANDGACQL LQVPRHELIG RRSTDLLGER SPAFIARLWQ GGVSSVQTAK
GEFYFRALQL PRHGRVTPST PSSKPALSKQ SPALDALAGG DQRLARNLRM ARQGLGNGLP
VLLLGETGTG KEVVARALHQ ASPRADKPFV AVNCAAIPEG LIESELFGYR EGAFTGSRRG
GMVGRLMQAH GGTLFLDEIG DMPLALQARL LRVLQERRVA PLGAGDEQDI DVALICATHR
DLKRLVQEQH FREDLFYRVN GVSLRLPALR ERDDLAAIIQ GLLDKADARG VTLDPALTAL
LEGFDWPGNI RQLEMVVRTA LAMREDGEQV LTLDHLTDCL LDELASSAAP SGSLKDSELE
QIRGALARHQ GNVSAAAAAL GISRATLYRK LKQLRG
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