Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3458 |
Symbol | |
ID | 1045574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3920074 |
End bp | 3921762 |
Gene Length | 1689 bp |
Protein Length | 562 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637146874 |
Product | acyl-CoA synthetase |
Protein accession | NP_745596 |
Protein GI | 26990171 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.220235 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCAGC CAAGCTACAC CCAGGGCACC CAGGACAAGC CCCTGCTGAC CCAATGCATC GGCGACGCCT TCGACGCCAC CGTAGCCCGC TTCCCCGACC GTGAGGCGCT GGTGGTTCAC CATCAGGCCC TGCGCTACAC GTGGCGGCAA CTGGCCGATG CCGTCGACCA GCACGCCCGC GCGCTGATGG CCCTGGGCGT GCAGCCCGGT GACCGTCTTG GCATCTGGGC ACCCAACTGC GCCGAGTGGT GCATTACCCA GTTCGCCAGC GCCAAGGTTG GCGCGATCCT GGTCAACATC AACCCGGCCT ACCGTTCCAG CGAACTGGAC TATGCCCTTG GCCAGTCCGG CTGCCGCTGG GTGATCTGTG CCGACGCATT CAAGACGTCC GATTACCACG CCATGCTGCA GGGCCTGCTC CCGGGCCTGG CCAGCAGCCA ACCGGGTGCG CTGATCTGCG AGCGGTTCCC CGAACTGCGT GGCGTGGTCA GCCTGGCGCT GTCGCCACCG CCGGGGTTTC TGGCCTGGCA CGCATTGCAG GCCCGTGCCG AGGTTGTCAG CGGCGAGGCC CTGGCCGCGC GCCAGGCACA ACTGCGTTGC GACGACCCGA TCAACATCCA GTACACCTCA GGCACCACCG GTTTCCCCAA GGGGGCCACC CTTAGCCACA GCAATATCCT CAACAACGGG TACATGGTCG GTGAAAGCCT GGGCCTTACC GAGCACGATC GGCTGGTGGT GCCGGTGCCG CTGTACCACT GCTTCGGCAT GGTCATGGCC AACCTTGGCT GCATGACACA CGGCAGCGCA CTGATTTACC CCAGCGATGC CTTCGACCCG CTGGCCACGC TGCGCGCAGT GGCGCAGGAA AAAGCCACTG CGCTGTATGG CGTGCCGACC ATGTTCATTG CCGAACTGGA CCATCCACAG CGTGGTGAAT TCGACCTGTC GAGCCTGCGC ACCGGGATCA TGGCCGGTGC GACCTGCCCG ATCGAGGTGA TGCGCCGGGT GATTGGCGAG ATGCACATGG CCGAAGTGCA GATTGCCTAT GGCATGACCG AGACCAGCCC GGTGTCCTTG CAGACCGGTG CCGCTGACGA CCTGGAGCGT CGCGTGACCA GCGTCGGTCG CACCCAGCCC CGGCTGGAGA GCAAGGTGGT GGACGCTGAA GGCAACACTG TCCCGCGTGG CGAGATCGGT GAACTGTGCA CCCGCGGCTA CAGCGTGATG CTGGGTTACT GGAACAACCC CAAAGCCACC GCCGAGAGCA TCGACGCAGA GGGCTGGATG CACACCGGCG ACCTGGCGGT GATGGACGAG CAGGGCTATG TGCGTATTGT CGGGCGCAGC AAGGACATGA TCATTCGCGG CGGCGAGAAC ATTTACCCGC GCGAGCTGGA GGAGTTCTTC TTCACCCACC CGGCGGTGGC CGATGTGCAG GTGATTGGCG TGCCCTGCAG CAAGTACGGT GAAGAGATCG TGGCCTGGGT GCGGCTGCAC CCGGGGCATG CTGTCAGTGA GGTAGAGTTG CGTGAGTGGG CGAGGGCAAG GATTGCGCAC TTCAAGGTGC CCCGGTATTT CCGTTTTGTC GACGAGTTCC CGATGACGGT GACGGGCAAG GTGCAGAAAT TCCGGATGCG CGAGATCAGT GTCGAAGAGC TGAAAGCAAC GGCCTTGCCC AAGATTTGA
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Protein sequence | MPQPSYTQGT QDKPLLTQCI GDAFDATVAR FPDREALVVH HQALRYTWRQ LADAVDQHAR ALMALGVQPG DRLGIWAPNC AEWCITQFAS AKVGAILVNI NPAYRSSELD YALGQSGCRW VICADAFKTS DYHAMLQGLL PGLASSQPGA LICERFPELR GVVSLALSPP PGFLAWHALQ ARAEVVSGEA LAARQAQLRC DDPINIQYTS GTTGFPKGAT LSHSNILNNG YMVGESLGLT EHDRLVVPVP LYHCFGMVMA NLGCMTHGSA LIYPSDAFDP LATLRAVAQE KATALYGVPT MFIAELDHPQ RGEFDLSSLR TGIMAGATCP IEVMRRVIGE MHMAEVQIAY GMTETSPVSL QTGAADDLER RVTSVGRTQP RLESKVVDAE GNTVPRGEIG ELCTRGYSVM LGYWNNPKAT AESIDAEGWM HTGDLAVMDE QGYVRIVGRS KDMIIRGGEN IYPRELEEFF FTHPAVADVQ VIGVPCSKYG EEIVAWVRLH PGHAVSEVEL REWARARIAH FKVPRYFRFV DEFPMTVTGK VQKFRMREIS VEELKATALP KI
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