| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3431 |
|---|
| Symbol | |
|---|
| ID | 1046181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 3887993 |
|---|
| End bp | 3888679 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637146847 |
|---|
| Product | ThiJ/PfpI domain protein |
|---|
| Protein accession | NP_745569 |
|---|
| Protein GI | 26990144 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGA AAATTCTGGT GGTGTTGACC AATACAGCGA AGTATCCAAC CCTCAAACGG
GCGACCGGGT TGTGGCTGGG TGAAGCCGTT CACTTTGTCG AGAAAGTCGA AAAGGCCGGC
TACACGGTCG ACTATGTCAG CCCACAGGGC GGTTACGTTC CCGTCGACCC GCACAGCCTG
CAGATGGCCC CGGACCTGGA CTGGCAGTGG TACGACGACA AGCGCTTCAT GACGCGTCTT
GGCAGTACCT TGGCCCCAGG GCAGGTGAAG GCTGACGAAT ACAGCGTCAT CTATTACACC
GGTGGGCATG GGGTGATGTA TGACTTCGCA GACAACCATG CTCTGCAGGA CCTGGCACGC
AAAATCTACG AAAAAGGTGG CATTGTCGCA GCAGTCTGTC ACGGCGTAGT CGGCCTGCTG
AACATCAAGC TGAGTAACAA CTGCCTGCTG CTCAAAAACC GCAAGGTGAC CGGCTTTTCC
AACATAGAGG AAAAACTGGC CGAACTGGAC GACGTAGTGC CGTTCCTGAC GGAGAACGAA
CTTGGGGCGC GCGGCGGTGA GTACAGCAAA CATGATGAGC CGTGGAAGCC GTACGTGGTC
GACGATGACA GGCTGATCAC CGGGCAGAAC CCCGCTTCCA CCGCCTTGCT GGCCGAGGCA
GTGCTGAAAA AGCTCAAGGG CAGTTAG
|
|---|
| Protein sequence | MSKKILVVLT NTAKYPTLKR ATGLWLGEAV HFVEKVEKAG YTVDYVSPQG GYVPVDPHSL
QMAPDLDWQW YDDKRFMTRL GSTLAPGQVK ADEYSVIYYT GGHGVMYDFA DNHALQDLAR
KIYEKGGIVA AVCHGVVGLL NIKLSNNCLL LKNRKVTGFS NIEEKLAELD DVVPFLTENE
LGARGGEYSK HDEPWKPYVV DDDRLITGQN PASTALLAEA VLKKLKGS
|
|---|
| |