| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3427 |
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| Symbol | oprN |
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| ID | 1046237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3881339 |
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| End bp | 3882754 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637146843 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | NP_745565 |
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| Protein GI | 26990140 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0491334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCTGC TCAAACCCTT GACCCCAAGC CTGCTGGCAC TGGCCCTGGC GGCCTGTGCG
GTAGGCCCGG ACTACCAGGC GCCAGCCACC GAACCTGCGC AATTGAGCAG CGATGTGCAG
GCCAAGGCCT ACGACCGTAG CCGCTTCGAG AGCCTGTGGT GGAAGCAGTT CGACGACCCG
GTGCTGAACC AGCTGGTGCA GGCTTCGCTG GACGGCAACC GTGACTTGCG CGTGGCCTTC
GCCCGCCTGA AATCGGCCCG TTCGATCCGC GAAGACGCCG AAAACGACCC GTTCCCGGTG
GTCACCAGCC GTGCCAGCAG CGATCTCGGC AAAGGCCAGA TCCCCGGCCA GACCACCGAG
CGGGTCAATA GCGAGCGCTA CGACCTGGGC CTGGACATGG CCTGGGAGCT TGACCTGTTC
GGGCGCATCC AGCGCCAGAT CGAAGCCAGC GAAGCCCAGG AAGCGGTTGC CGCCGCCGAC
CTGCAACAGT TGCAGGTCAG CCTGATCGCC GAACTGGTCG ATGCCTACGG GCAACTGCGC
GGTGCCCAGT TGCGCGAAAA GATCGCCCTG GCCAACCTGA AGACCCAGCA GGAATCACGC
ACCATTACCG AAACCCTGCG CGATGCGGGC GTGGGCAATG ACCTCGACGT GGTGCGTGCC
GATGCGCGCC TGGCCGGGGT CGAAGCCACC GTGCCACAAC TGCAAGCCGA ACAGGCACGG
GCGCGGCATC GCATCGCCAC CCTGCTCGGC CAGCGCCCTG ACGCGCTCAG CGTAGACCTG
TCGCCCAAGG CCCTGCCGGC CATCGCCAAG GCGCTGCCGG TCGGTGACCC GGGTGAGCTG
CTGCGCCGCC GCCCGGACAT CCGCAGCGCC GAGCGCCAGC TGGCGGCGGC CACCGCCAAC
GTTGGCGTGG CCACCGCCGA CCTGTTCCCG CGCGTCAGCC TCAGTGGCTT CCTCGGCTTT
ACCGCCGCCC GCGGCTCGCA GATCGGCTCT TCGGCGGCCA ACGCCTGGGC ACTGGGCCCG
AGCATTACCT GGGCGGCCTT CGACCTGGGC AGCGTGCGGG CCCGCCTGCG CGGCGCCAAG
GCCGATGCCG AAGGGGCACT GGCCAACTAC GAACAGCAGG TGCTGCTGGC ACTGGAAGAG
TCGGCCAACG CCTTCAGCGA TTACGACAAG ACCCAACAGC GTCTGCTGTC GCTGATGCGC
CAGAGCGACG CCAGCCGCAA GGCTGCAGAA CTGGCCTCGA TTCGCTATCG CGAAGGTACC
GTGGACTACC TGGTACTGCT CGATGCCGAA CGTGAGCGGC TAAGTGCTGA AGATGCACAA
GCTCAGGGTG AAGTCGACCT TTATCGCGGC ATCGTCTCGA TCTACAAGGC CCTGGGTGGC
GGCTGGCAAC CGGAGACGGT GGCCAGCGCG CACTGA
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| Protein sequence | MNLLKPLTPS LLALALAACA VGPDYQAPAT EPAQLSSDVQ AKAYDRSRFE SLWWKQFDDP
VLNQLVQASL DGNRDLRVAF ARLKSARSIR EDAENDPFPV VTSRASSDLG KGQIPGQTTE
RVNSERYDLG LDMAWELDLF GRIQRQIEAS EAQEAVAAAD LQQLQVSLIA ELVDAYGQLR
GAQLREKIAL ANLKTQQESR TITETLRDAG VGNDLDVVRA DARLAGVEAT VPQLQAEQAR
ARHRIATLLG QRPDALSVDL SPKALPAIAK ALPVGDPGEL LRRRPDIRSA ERQLAAATAN
VGVATADLFP RVSLSGFLGF TAARGSQIGS SAANAWALGP SITWAAFDLG SVRARLRGAK
ADAEGALANY EQQVLLALEE SANAFSDYDK TQQRLLSLMR QSDASRKAAE LASIRYREGT
VDYLVLLDAE RERLSAEDAQ AQGEVDLYRG IVSIYKALGG GWQPETVASA H
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