| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3406 |
|---|
| Symbol | |
|---|
| ID | 1046059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 3856944 |
|---|
| End bp | 3857423 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637146823 |
|---|
| Product | acetyltransferase |
|---|
| Protein accession | NP_745545 |
|---|
| Protein GI | 26990120 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1247] Sortase and related acyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.344947 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCA CCTTTCGCCC TGCCGTGCGT ACCGATGCCG AGCAGATCCT CACCTTCATC
ACCGAACTCG CCGAGTACGA ACGCGCCCGC CACGAGGTGG TCGCCACCCT TGCCGACATC
GAGCACAGCC TGTTCGACGA AGGCAGCACT GTGCACGCCC TGATGTGCGA GCGTGATGGC
CGTGCAATCG GCTTTGCCGT GTACTTCTAC AGCTACTCGA CCTGGCTCGG GCGCAATGGC
ATCTATCTGG AAGACCTGTA CGTAACCCCC GAACATCGCG GCGATGGTGC CGGCCGGCAG
TTGTTGCAGC ACATTGCCCG CGAAGCGGTG GCGAACAACT GTGGGCGCCT GGAATGGAGT
GTGCTGGACT GGAACGAGCC AGCGATCGGC TTCTACCAGA AACTGGGGGC CGAGGCGCAG
GATGAGTGGG TGCGCTACCG GCTGGATGGC GACAAGCTGG CGGCATTCGC CCGCGGGTGA
|
|---|
| Protein sequence | MSLTFRPAVR TDAEQILTFI TELAEYERAR HEVVATLADI EHSLFDEGST VHALMCERDG
RAIGFAVYFY SYSTWLGRNG IYLEDLYVTP EHRGDGAGRQ LLQHIAREAV ANNCGRLEWS
VLDWNEPAIG FYQKLGAEAQ DEWVRYRLDG DKLAAFARG
|
|---|
| |