Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3403 |
Symbol | |
ID | 1044849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3854312 |
End bp | 3855199 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637146820 |
Product | Pirin domain protein |
Protein accession | NP_745542 |
Protein GI | 26990117 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.397774 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGA TTCTGGGTAT TCACCGCAGC CCCCACGCCC ATTGGGTGGG TGATGGTTTC CCGGTGCGCA GCCTGTTCAC CTACGACAAC CTGGCCAGCC AGATCAGCCC GTTCCTGCTG CTGGACTACG CCGGTCCGCA TGATTTCACC CCGACCCGAG CACGACGCGG CGTAGGCCAG CATCCGCATC GCGGCTTCGA GACCGTGACC ATCGTCTACC AAGGTGAACT GGAGCACCGT GATTCCACCG GTGCTGGCGG GTTGATCGGT CCAGGTGACG TGCAGTGGAT GACGGCGGCC AACGGCATCA TTCATGAGGA GTTTCATTCC CCCGACTTTG CACGCAGTGG CGGCACGCTG GAAATGGTCC AGCTGTGGGT GAACCTGCCG GCGCGGGACA AGCGTGCAGC GGCCGGCTAC CAGACGCTGC TGGCCGGCGA CATTCCGGTG GTAGCGCTCG ACGGTGATGC CGGGAGCTTG CGGGTGATTG CCGGTGACTA CCACGGCCAC CAGGGTCCGG CTCGAACCTT CACCGCGATG GACGTGTGGG ATTTGCGGCT CAACGCCGGC GCGGCCTTGC AGTTGCCGGT TGCTGCCGGT CGCAATGCGG CGCTGGTGGT GTTGCGTGGT AACGTTCGAA TCAACGGCGA GCGCGAAGCA GGCCCGTCCA GCCTGGTACT GCTCGACCGG GAGGGTGTAG ATGTAGGCGT CGAGGCGCTG GACGGCGCAA GTGTGCTGCT GCTCAGCGGT GAGCCGATCG ACGAGCCGAT CGTTGGCTAC GGCCCGTTCG TGATGAACAG CCAGGCGGAG ATTGCCGAGT CGTTCGATGA TTTCCATGCC GGGCGGTTTG GGCAGATGCA GGACGAGAGG GGAGGCGCCG CACACTGA
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Protein sequence | MKTILGIHRS PHAHWVGDGF PVRSLFTYDN LASQISPFLL LDYAGPHDFT PTRARRGVGQ HPHRGFETVT IVYQGELEHR DSTGAGGLIG PGDVQWMTAA NGIIHEEFHS PDFARSGGTL EMVQLWVNLP ARDKRAAAGY QTLLAGDIPV VALDGDAGSL RVIAGDYHGH QGPARTFTAM DVWDLRLNAG AALQLPVAAG RNAALVVLRG NVRINGEREA GPSSLVLLDR EGVDVGVEAL DGASVLLLSG EPIDEPIVGY GPFVMNSQAE IAESFDDFHA GRFGQMQDER GGAAH
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