Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3371 |
Symbol | |
ID | 1046764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3814857 |
End bp | 3816116 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637146789 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | NP_745511 |
Protein GI | 26990086 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.335551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.20337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGGC GTCTGTTCTG GAAGCTGTTC CTGGCCTTCT GGCTTGCCAA TACCCTGACC TTCCTGGTGG GGGCGGGGGC CTTCATGCTC AATGAGCTGC GCGGCGATAC CCCCGGGCTG CGTTCGCTGC TGGCCACCGA GCTGCAAATG CTCGAACGGC ATGGCGAGCG GGCCGGCCGC CAGTTGCTTG ACGTGTCGCC ACAGCCGCAG GATGTGCAAG TAGGCCTTTA CGACGATCAA GACCGCTTGC TGGCTGGCCA AACGGTGCAC GTGGCGCGCT TCGAGCAGGC ACTGCTCGAC CGTGACGGCC GCCCACTGGT GCTGCGCGCT TCGGTGGCCA CCCGTGTCGG TATGGCACCG CGCCCACGCA ACCTTGGCCC GTTCGTGACT GGGGCGGTGA TGAGCGCGCT GTTCGCGCTG TTGTGCAGCT TTTACCTGAC CCGGCCGCTG ACCTGGCTGC GCGAGGCCAT GGGCCAGGTT GCCCAAGGCC GTTTCGATGT GCGGGTCAGG CCGCGGCTGG GCAAGCGCCG TGACGAAATC GTCGACCTGG CCGAGGACTG TGACCGCATG GCCGGCCAGC TCAAGGCCCT GGTGCAGGCC CAGCAGAACC TGCTGCATGA TATTTCCCAT GAGCTGCGCT CACCACTTAC CCGCATGCAT GCCGCCATAG GCCTGATGCG CCAGCAACCC GACCGGCCCG ACATGCTGGA GCGGGTCGAG CGCGAGTCGC GGCGCATGGA CGACCTGATC GAGCAACTGC TGACCCTGGC CCGTGCCCAG TCCCGTCAAG GCAACAGTGA CTTCGCCAGC GTGGATGTGG TCGAACTGCT GGCGCAGATC GTCGAGGATG CCCGTTTCGA GGCAGGCATG AAGCAGTGCC AGGTGTCCTT GCTGGCTCAG GGCGCGTTTC TCATGCATGG CCATGAAGAA CTCCTGTACC GGGCCTTCGA GAACGTCATC CGCAATGCCG TGCGCTACAC GAAGCCCGGC ACGGCGGTAT TGGTGGAGGC CGCACCGGCA CCAGGTGGGC AATGGTTGCA GGTGTGCGTC AGCGACCATG GCCCGGGCGT CGACCCGGCG CGCCTGCAGC GCATCTTCGA ACCGTTCGAC CGTGGCACCG ACAGCAGCGA TGGCTTCGGC CTGGGGCTGG CGATCGCCCA GCGTGCCATC GCCTTGCACG GTGGCAGCAT CACCGCGCTG GCCGCCGCCA CAGGGGGCTT GCGGGTGCGC ATCGAACTGC CGCAAGCCAT TGCTACTTGA
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Protein sequence | MRRRLFWKLF LAFWLANTLT FLVGAGAFML NELRGDTPGL RSLLATELQM LERHGERAGR QLLDVSPQPQ DVQVGLYDDQ DRLLAGQTVH VARFEQALLD RDGRPLVLRA SVATRVGMAP RPRNLGPFVT GAVMSALFAL LCSFYLTRPL TWLREAMGQV AQGRFDVRVR PRLGKRRDEI VDLAEDCDRM AGQLKALVQA QQNLLHDISH ELRSPLTRMH AAIGLMRQQP DRPDMLERVE RESRRMDDLI EQLLTLARAQ SRQGNSDFAS VDVVELLAQI VEDARFEAGM KQCQVSLLAQ GAFLMHGHEE LLYRAFENVI RNAVRYTKPG TAVLVEAAPA PGGQWLQVCV SDHGPGVDPA RLQRIFEPFD RGTDSSDGFG LGLAIAQRAI ALHGGSITAL AAATGGLRVR IELPQAIAT
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