| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3343 |
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| Symbol | nikB |
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| ID | 1046989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3781123 |
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| End bp | 3782064 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637146761 |
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| Product | nickel transporter permease NikB |
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| Protein accession | NP_745483 |
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| Protein GI | 26990058 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | [TIGR02789] nickel ABC transporter, permease subunit NikB |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCGCT ACATCCTGTT GCGCCTGGCG CTGCTTGTGC CGGTCATGCT TGGCGCTTCG
TTGCTGGTGT TCGTGCTGCT ACACCTGGGC AGCACAGACC CGGCGCTGGA CTACCTTCGG
CTTTCGCACA TTCCACCGAC CGACGCCGCC ATTGCCGAAG TGCGCCATAC CCTGGGGCTG
GATCGTCCGC TGTATGCGCA ATACCTGAGC TGGCTGTGGA ACGCCGTGCA TCTGGACTTC
GGCATCTCCT ACATCACCGG CCGTCCCGTG CTCGATGACC TGCTCTACTA CCTGCCCGCC
ACCCTGCAGC TCGGCGGCCT GGCGTTAGCC TGCACGCTGC TGCTGTCGAT CCCCTTGGGG
CTGTTGGCGG CCCGCTGGCA AGGGCGCTGG CCCGACCACG CCGTGCGGGC AGTGACCTTC
CTGGGGGTGT CCATGCCCAA TTTCTGGCTG GCGTTTCTGC TGATCGCGCT TTTTTCCCTG
TGGCTGGGCT GGCTGCCGCC GCTGGGGCGT GGAGGGGCCG GGCACCTGGT GATGCCGGTG
CTGGCGATCG CCCTGATGTC GATGTCGATC AACGCCCGCC TGCTGCGTGC CAGCCTGCTG
GATGCCGGCG GGCAGCGGCA CGTCACCTAT GCCCGTGCCC GCGGCCTGCC CGAACGGCAT
GTCTGGCGTG ACCATATCCT GCGCAATGCC TGGCTGCCGC TGGTGACGGC CACCGGCATG
CACATCGGCG AACTGCTCGG CGGCGCACTG GTGATCGAGA CGATCTTCGC CTGGCCCGGC
GTTGGTCGTT TTGCGGTGTC GGCAGTGCTT AACCGCGACT TCCCGGTGAT GCAGTGCTTC
ACCCTGCTAC TGACCGGCCT GCTGATGATC TGTAACCTGA TAGTCGATGT GTGCTACGCC
TGGCTTGATC CTCGCAGCCG GCTGGAAGGG GTGAACGCAT GA
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| Protein sequence | MLRYILLRLA LLVPVMLGAS LLVFVLLHLG STDPALDYLR LSHIPPTDAA IAEVRHTLGL
DRPLYAQYLS WLWNAVHLDF GISYITGRPV LDDLLYYLPA TLQLGGLALA CTLLLSIPLG
LLAARWQGRW PDHAVRAVTF LGVSMPNFWL AFLLIALFSL WLGWLPPLGR GGAGHLVMPV
LAIALMSMSI NARLLRASLL DAGGQRHVTY ARARGLPERH VWRDHILRNA WLPLVTATGM
HIGELLGGAL VIETIFAWPG VGRFAVSAVL NRDFPVMQCF TLLLTGLLMI CNLIVDVCYA
WLDPRSRLEG VNA
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