Gene PP_3308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3308 
Symbol 
ID1046453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3743190 
End bp3743717 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content63% 
IMG OID637146729 
Productoxidoreductase, small subunit, putative 
Protein accessionNP_745451 
Protein GI26990026 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.423125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0215353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA TCTCTCCCAA TGGGGCTGAA GAACACCCCA TCGGCCTGAC CCTGAATGGT 
CAGCGCCTGA CACTGCAGGT GAATCCCTGG ACCACCCTCC TCGACCTTTT GCGCGAGCAG
TTGGACCTGG TCGGCACCAA GAAGGGTTGC GACCATGGCC AGTGCGGGGC CTGCACAGTG
CTGCGCGATG GCAAGCGCGT CAATGCCTGC CTGACTTTGG CCATCATGTG CGACGGGGCC
GAACTGGTGA CCATCGAAGG GCTGGCCAGC GGCGACGTTC TGCACCCCAT GCAGCGTGCA
TTCATCACCC ACGATGCTTT CCAGTGCGGT TACTGCACCC CGGGGCAGAT CTGCTCCGCA
GTCGGGCTTG CCCGCGAAGG GCGCGCCTAC ACCCGCGAGG CCATTCGCGA ACAGATGAGC
GGCAACCTTT GCAGGTGTGG TGCATATAGC AACATCGTCG CTGCGGTGGA AGAAGCCCTA
CCGTTGATGA CGGACCTGGC CCCGCCACAA CGAGGGCCGA ATCCATGA
 
Protein sequence
MSAISPNGAE EHPIGLTLNG QRLTLQVNPW TTLLDLLREQ LDLVGTKKGC DHGQCGACTV 
LRDGKRVNAC LTLAIMCDGA ELVTIEGLAS GDVLHPMQRA FITHDAFQCG YCTPGQICSA
VGLAREGRAY TREAIREQMS GNLCRCGAYS NIVAAVEEAL PLMTDLAPPQ RGPNP