| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3285 |
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| Symbol | phaM |
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| ID | 1046933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3719744 |
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| End bp | 3720343 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637146706 |
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| Product | phenylacetic acid degradation protein PaaY |
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| Protein accession | NP_745428 |
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| Protein GI | 26990003 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
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| TIGRFAM ID | [TIGR02287] phenylacetic acid degradation protein PaaY |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.521801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTTGCT ATCGACTGGA CGGCCTGACG CCTGTGGTTC ACCCGACAGC CTACGTGCAC
CCCAGCGCAG TCCTGATCGG TGACGTCATC GTCGGCCCCC GCTGCTACAT TGGCCCGCTG
GCATCGCTCA GGGGCGATTT CGGCCGCATC GTGCTGGAGG AGGGCGCCAA CTTGCAGGAC
ACCTGCGTGA TGCATGGTTT CCCGGGGGGC GACACCGTAG TGGAACGTAA CGGGCATGTC
GGCCACGGCG CCGTGCTGCA CGGCTGTCGC GTCGGCGAAG ATTCATTGAT CGGCATGAAC
GCCGTGGTGA TGGATGGCGC CCATGTAGCA CCTCGCTGCA TCGTCGCGGC CACCGCCTTC
GTCAAAGCTG GCTTCGAATG TGCGGCGCAG AGCCTGGTGA TGGGGTCGCC AGCCCAGGTC
AAACGCCCAC TGAGCGAGCA GGAGCTGGCC TGGAAACAGC GCGGGACGGC GGAGTACCAG
CACCTGGCGC AGCGCTGCAT GAACAGCATG GTCGAATGCC CACCGCTGGC CGAGGCAGAG
CCGGGGCGCC CGCGCATGGA AGACACCGGG GTCAGGCCCA AGGGCCAGGC AAGCGCATGA
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| Protein sequence | MPCYRLDGLT PVVHPTAYVH PSAVLIGDVI VGPRCYIGPL ASLRGDFGRI VLEEGANLQD
TCVMHGFPGG DTVVERNGHV GHGAVLHGCR VGEDSLIGMN AVVMDGAHVA PRCIVAATAF
VKAGFECAAQ SLVMGSPAQV KRPLSEQELA WKQRGTAEYQ HLAQRCMNSM VECPPLAEAE
PGRPRMEDTG VRPKGQASA
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