Gene PP_3271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3271 
SymbolphaK 
ID1046920 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3706036 
End bp3707289 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content63% 
IMG OID637146692 
Productouter membrane porin 
Protein accessionNP_745414 
Protein GI26989989 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGGTA AAACAACAAC AATGAACCGC ACACACTTCC TGTCAGCCGC CTGGCTGGCC 
ACCGTTGCCC TGCCGATGCC CGCGCTGGCC GACTTCATCG GCGACAGCCA TGCACGCCTG
GAGCTGCGCA ACCACTACAT CAACCGTGAT TTCCGCCAGA GCAACGCCCC GCAGGCCAAG
GCCGAGGAAT GGGGCCAAGG CTTTACCGCC AAGCTCGAAT CGGGCTTTAC CGAGGGCCCG
GTCGGCTTTG GCGTGGATGC CCTGGGCCAG TTGGGCATCA AGCTCGACTC CAGCCGCGAC
CGTCGCAACA CCGGCCTGCT GCCTTTTGGC CCGAACAGTC ACGAACCGGT CGACGACTAC
AGCGAGCTGG GCCTGACCGG CAAGGTACGT GTGTCCAAGA GCACCTTGCG GCTGGGCACC
TTGCAGCCGA TCCTGCCGGT GGTGGTGTAC AACGACACCC GCCTGCTGGC GTCCAGCTTC
CAGGGTGGCC TGCTCACCAG TCAGGACCTC GATGGCCTCA CCTTCAATGC CGGACGCCTG
ACCAAGGCCA ACCTGCGTGA CTCCTCTGGC CGCGACGACA TCGGCTATGG CGCTGCCAGC
AGTGACCACC TGGACTTTGG TGGTGGCAGC TACGCCATCA CCCCGCAAAC CACGGTCAGC
TATTACTACG CCAAGCTCCA GGACATCTAC CGTCAGCAGT TCGTCGGTCT GATCGACACC
CGCCCGCTGG CAGAAGGTGT GAGCCTGCGC AGTGACCTGC GCTACTTCGA CAGCCGCAAC
GACGGTGCCG AGCGTGCCGG CAACATCGAC AACCGTAACT TCAACGCCAT GTTCACCCTG
GGCGTGCGGG CGCACAAGTT CACCGCCACC TGGCAGCAGA TGTCCGGTGA CAGCGCCTTC
CCGTTCGTCA ACGGCGGCGA CCCGTTCACC GTCAACCTGG TCACCTACAA CACCTTCACC
CGCGCCGGGC TGGACTCTTG GCAAGTGCGC TACGACTACG ACTTCGTTGC CATGGGCATC
CCCGGCCTGA GTTTCATGAC CCGCTATACC GACGGTCGCC ACGCGGAAAC TGCCACCGTG
ACCAATGGCC GTGAGCGCGA GCGCGACACC GACATCACGT ATGTCATCCA GAGTGGCCCG
TTCAAGGACG TCAGCCTGCG CTGGCGCAAT GTCACCTTCC GCTCCGGCAA CGGCCTGACC
AACGCCGTGG ACGAAAACCG CCTGATCATC GGCTACACCC TGGCGCTGTG GTAA
 
Protein sequence
MSGKTTTMNR THFLSAAWLA TVALPMPALA DFIGDSHARL ELRNHYINRD FRQSNAPQAK 
AEEWGQGFTA KLESGFTEGP VGFGVDALGQ LGIKLDSSRD RRNTGLLPFG PNSHEPVDDY
SELGLTGKVR VSKSTLRLGT LQPILPVVVY NDTRLLASSF QGGLLTSQDL DGLTFNAGRL
TKANLRDSSG RDDIGYGAAS SDHLDFGGGS YAITPQTTVS YYYAKLQDIY RQQFVGLIDT
RPLAEGVSLR SDLRYFDSRN DGAERAGNID NRNFNAMFTL GVRAHKFTAT WQQMSGDSAF
PFVNGGDPFT VNLVTYNTFT RAGLDSWQVR YDYDFVAMGI PGLSFMTRYT DGRHAETATV
TNGRERERDT DITYVIQSGP FKDVSLRWRN VTFRSGNGLT NAVDENRLII GYTLALW