Gene PP_3250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3250 
Symbol 
ID1046900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3683702 
End bp3684985 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content64% 
IMG OID637146671 
Productmajor facilitator transporter 
Protein accessionNP_745393 
Protein GI26989968 
COG category[C] Energy production and conversion 
COG ID[COG3202] ATP/ADP translocase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.840395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGCCT GGCGGCGGCG CCTGGACCAA GGGCTGAACA TTCAGCCTGG TGAGGGGCCG 
GCGGTCATCG CCGGCTTGTT GCTGTTCTAC CTGCTGTTCA CTGGTTACTT CATGCTGCGC
CCGGTACGCG AAACCATGGG CGTTGCCGGT GGCGTGGAAA ACCTGCAGTG GCTGTTCACC
GGCACCTTCA TTGCCACGTT GGCGTGCCTG CCGCTGTTTG GCTGGCTGGC CTCCAGGGTG
CAGCGCAGGC ATATCCTGCC TTGGACTTAT GGTTTTTTCG CCAGCAACCT GTTGCTGTTC
GCGGCACTGT TGGCCGGTAA CCCTGACGAC CTCTGGACCG CCCGGGCGTT CTATATCTGG
CTGTCGGTGT TCAATTTGCT GACGATCTCG CTGGCCTGGA GCGTGCTCGC CGATCTGTTT
TCCACCGCCC AGGGCAAGCG GCTGTTCGGT CTGCTGGCAG CCGGGGCCAG CCTGGGCGGG
CTCAGTGGCC CCGTGCTTGG CACGTTGCTG GTGGCGCCGC TCGGCCATGC CGGGTTGTTG
GTGCTAGCGG CGGTGCTTCT GCTGGGCAGT ATCGGCGCGA CACTGTTCCT GCAACGCTGG
CGAGCACGCC AACCCATTGC GATGCAAACC GAACACCAGG GCTCGCGGCC ACTGGGTGGC
AACCCGTTTA CCGGCGCCAG CGCCGTACTG CGCTCGCCCT ATCTGCTAGG CATCGCTTTG
TTCGTGGTAT TGCTGGCCAG CGTCAGCACG TTCCTGTACT TCGAGCAGGC GCGTATTGTC
AGCGAAACCT TCACTGACCG CACCCGGCAG ACACAGGTGT TCGGCCTGAT CGACACGGTT
GTGCAGGCCC TGGCCATCCT CACCCAGGTC TTTCTTACCG GGCGTCTGGC CCGTCGGCTG
GGTGTCGGTG TGTTGCTGGT TGCAGTGCCG CTGATAATGG CTGCCGGCTT CTTGTGGCTG
GCACTGGCCC CGGTGTTCGC CCTGTTTGTG GTGGTGATGG TGGTGCGGCG GGCAGGTGAA
TACGCATTGG TGCGGCCAGG GCGGGAGATG CTGTTCACTG TGCTGTCCGC CGAGGACAAG
TACAAAGCCA AGAACTTCAT CGACACCGTG GTCTACCGTG GCGGCGATGC GCTGAGCGGC
TGGGTCAAGC GTGCGCTGGA CGTGATGGGC GAACACCCGC AATTGGCGAT GCTCATCGGC
GCGTTGCTTG CCGTGGGCTG GGGCGCGACA GGCGCTTGGC TGGGCCGCCG GCAGGCGCGC
ATGGATAGCC CGCCGCACCA CTGA
 
Protein sequence
MQAWRRRLDQ GLNIQPGEGP AVIAGLLLFY LLFTGYFMLR PVRETMGVAG GVENLQWLFT 
GTFIATLACL PLFGWLASRV QRRHILPWTY GFFASNLLLF AALLAGNPDD LWTARAFYIW
LSVFNLLTIS LAWSVLADLF STAQGKRLFG LLAAGASLGG LSGPVLGTLL VAPLGHAGLL
VLAAVLLLGS IGATLFLQRW RARQPIAMQT EHQGSRPLGG NPFTGASAVL RSPYLLGIAL
FVVLLASVST FLYFEQARIV SETFTDRTRQ TQVFGLIDTV VQALAILTQV FLTGRLARRL
GVGVLLVAVP LIMAAGFLWL ALAPVFALFV VVMVVRRAGE YALVRPGREM LFTVLSAEDK
YKAKNFIDTV VYRGGDALSG WVKRALDVMG EHPQLAMLIG ALLAVGWGAT GAWLGRRQAR
MDSPPHH