Gene PP_3227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3227 
Symbol 
ID1046876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3663016 
End bp3663906 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content64% 
IMG OID637146648 
ProductLysR family transcriptional regulator 
Protein accessionNP_745370 
Protein GI26989945 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCG ATGATATGGA CGCCTTCGTC GCCGTCATTC GTTGCCAGTC CACCAACCTT 
GCCGCCGAGG CCCTGCAACT GACGCAGCCG GCCATTACCC GCCGGGTGCA GAATTTCGAG
GAAGACCTCG GCGCCACCCT CCTCGACCGC AACACCAAGC CGCTCAAGCC CACCCCCATG
GGCTTGCGGG TCTATGAGCA GTGCAAGGCG ATCCTGCGCG AGATAGACTC GCTGCGTGAA
CTGGTAGCCA ACGACGGCGC GCCGTCGGGC ACCTTGCGCC TGGGTGTGCC GCAGACATTG
GGCGACGTTG TGCTGCTCGA CGCCCTGGCA CAGATCCGTG AGGCCTACCC CCAACTGCGC
ACCCAGGTCA CCAGCGGCTG GGGCAGCAGC CTGATCGCGC GCATGGAAAA CGGTGAGCTG
GACGCTGCCG CGGCCCTGTT CCCGCCTGGC AAGATTTTCC CCGAAGGGAT CGCCAGCCAG
TCGATCGCGC GCATGCCGCT GAGGGTGGTC ACGGCCAAGG GCAGCGCCGG CAAGCGCAGC
TACAAGCTCA AGGACTGCTA CACCCGCGGC TGGGTGCTGA ACCCGGATGG CTGTGGCTTC
CGCGCTGGGC TGCAACGGGC ACTGAGTGAG CAAGGGCTGA GCCTGTCGAT CAACCTCGAA
ACCTTCGGCA CCGAGTTGCA ACTGGGGCTG GTCGCCAACG GCCAGGGCCT GGGACTGGTT
CCCGAGCCGC TGTTACAGAC CAGCCGCCAC CGCAGTGCGC TGGATGTACT GAATATCAGC
GATTTCAAGC CGCAGGTGGA TCTGTGGCTG TTCCATCCGC GCTACCTGGG TAATTTACAG
GAGCCGGTGG AGCTTTTTGG TGAGGTCGCG GGACATCGGT TGTTGGGTTG A
 
Protein sequence
MKIDDMDAFV AVIRCQSTNL AAEALQLTQP AITRRVQNFE EDLGATLLDR NTKPLKPTPM 
GLRVYEQCKA ILREIDSLRE LVANDGAPSG TLRLGVPQTL GDVVLLDALA QIREAYPQLR
TQVTSGWGSS LIARMENGEL DAAAALFPPG KIFPEGIASQ SIARMPLRVV TAKGSAGKRS
YKLKDCYTRG WVLNPDGCGF RAGLQRALSE QGLSLSINLE TFGTELQLGL VANGQGLGLV
PEPLLQTSRH RSALDVLNIS DFKPQVDLWL FHPRYLGNLQ EPVELFGEVA GHRLLG