Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3227 |
Symbol | |
ID | 1046876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3663016 |
End bp | 3663906 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637146648 |
Product | LysR family transcriptional regulator |
Protein accession | NP_745370 |
Protein GI | 26989945 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCG ATGATATGGA CGCCTTCGTC GCCGTCATTC GTTGCCAGTC CACCAACCTT GCCGCCGAGG CCCTGCAACT GACGCAGCCG GCCATTACCC GCCGGGTGCA GAATTTCGAG GAAGACCTCG GCGCCACCCT CCTCGACCGC AACACCAAGC CGCTCAAGCC CACCCCCATG GGCTTGCGGG TCTATGAGCA GTGCAAGGCG ATCCTGCGCG AGATAGACTC GCTGCGTGAA CTGGTAGCCA ACGACGGCGC GCCGTCGGGC ACCTTGCGCC TGGGTGTGCC GCAGACATTG GGCGACGTTG TGCTGCTCGA CGCCCTGGCA CAGATCCGTG AGGCCTACCC CCAACTGCGC ACCCAGGTCA CCAGCGGCTG GGGCAGCAGC CTGATCGCGC GCATGGAAAA CGGTGAGCTG GACGCTGCCG CGGCCCTGTT CCCGCCTGGC AAGATTTTCC CCGAAGGGAT CGCCAGCCAG TCGATCGCGC GCATGCCGCT GAGGGTGGTC ACGGCCAAGG GCAGCGCCGG CAAGCGCAGC TACAAGCTCA AGGACTGCTA CACCCGCGGC TGGGTGCTGA ACCCGGATGG CTGTGGCTTC CGCGCTGGGC TGCAACGGGC ACTGAGTGAG CAAGGGCTGA GCCTGTCGAT CAACCTCGAA ACCTTCGGCA CCGAGTTGCA ACTGGGGCTG GTCGCCAACG GCCAGGGCCT GGGACTGGTT CCCGAGCCGC TGTTACAGAC CAGCCGCCAC CGCAGTGCGC TGGATGTACT GAATATCAGC GATTTCAAGC CGCAGGTGGA TCTGTGGCTG TTCCATCCGC GCTACCTGGG TAATTTACAG GAGCCGGTGG AGCTTTTTGG TGAGGTCGCG GGACATCGGT TGTTGGGTTG A
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Protein sequence | MKIDDMDAFV AVIRCQSTNL AAEALQLTQP AITRRVQNFE EDLGATLLDR NTKPLKPTPM GLRVYEQCKA ILREIDSLRE LVANDGAPSG TLRLGVPQTL GDVVLLDALA QIREAYPQLR TQVTSGWGSS LIARMENGEL DAAAALFPPG KIFPEGIASQ SIARMPLRVV TAKGSAGKRS YKLKDCYTRG WVLNPDGCGF RAGLQRALSE QGLSLSINLE TFGTELQLGL VANGQGLGLV PEPLLQTSRH RSALDVLNIS DFKPQVDLWL FHPRYLGNLQ EPVELFGEVA GHRLLG
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