Gene PP_3224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3224 
Symbol 
ID1046872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3659937 
End bp3660731 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content63% 
IMG OID637146645 
Productaldolase II superfamily protein 
Protein accessionNP_745367 
Protein GI26989942 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.217165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCAC TGTCTGCCTT CACCACCAGC ACCTGCAACG TACGCGACCG GGTCAGCGCC 
GAAGAGTGGG AGGTGCGGGT CAAGCTGGCC GCCGCTTACC GTCTGGCTGC GCTGCTGCGC
TGGACCGACC ACATCTACAC GCACTTCTCG GTCCGCGTGC CGGGGCCGCA TGAGCATTTT
CTGATAAACG CCTTCGGCCT GCTGTTCGAC GAAATTACCG CCTCCAACCT GGTCAAGGTC
GACGTCGACG GCGCGATCAT CGACGACCCG CTGGGGCTGG GCATCAATCA GGCCGGGTAC
GTCATTCACA GCGCCATCCA CCGCGCACGG CCTGATCTCA AGGCTGTGCT GCACACCCAT
ACTCGCGACG GCGCGGCTGT GTCCGCCCAG CGCGACGGGT TGCTGCCGAT CTCCCAGCAC
GCCTTGGCCT ACTACAGCCG CGTGGTTTAC CACGACTACG AAGGCGTCGC CCTGGACCTG
GACGAGCAAG CACGGCTGGT GGCCAATCTG GGCGACAGCA ACATTCTTAT TTTGCGCAAC
CACGGGCTGC TGACCGGAGG TGTCAGCGTG GAACACGCGT TCCGTGAGCT GCACGGGCTG
GAGCGGGCCT GCAACATCCA GATCGCCGCC CAGGCCGGGG GCAACGACCA ACTGTTACAT
GCCTCAAAGG CGGCGATTGT CAAGGTGCAT GAGCAGTCCA AGCGGTTTTC CGATGGCCAG
GGGGAAGGTA TCCAACGGCA TTGGGATGCG CTGATTCGGC AGTTGGATCG CGAGGGCCTC
GATTACCAGG ACTGA
 
Protein sequence
MSSLSAFTTS TCNVRDRVSA EEWEVRVKLA AAYRLAALLR WTDHIYTHFS VRVPGPHEHF 
LINAFGLLFD EITASNLVKV DVDGAIIDDP LGLGINQAGY VIHSAIHRAR PDLKAVLHTH
TRDGAAVSAQ RDGLLPISQH ALAYYSRVVY HDYEGVALDL DEQARLVANL GDSNILILRN
HGLLTGGVSV EHAFRELHGL ERACNIQIAA QAGGNDQLLH ASKAAIVKVH EQSKRFSDGQ
GEGIQRHWDA LIRQLDREGL DYQD