Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3224 |
Symbol | |
ID | 1046872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3659937 |
End bp | 3660731 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637146645 |
Product | aldolase II superfamily protein |
Protein accession | NP_745367 |
Protein GI | 26989942 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.217165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCAC TGTCTGCCTT CACCACCAGC ACCTGCAACG TACGCGACCG GGTCAGCGCC GAAGAGTGGG AGGTGCGGGT CAAGCTGGCC GCCGCTTACC GTCTGGCTGC GCTGCTGCGC TGGACCGACC ACATCTACAC GCACTTCTCG GTCCGCGTGC CGGGGCCGCA TGAGCATTTT CTGATAAACG CCTTCGGCCT GCTGTTCGAC GAAATTACCG CCTCCAACCT GGTCAAGGTC GACGTCGACG GCGCGATCAT CGACGACCCG CTGGGGCTGG GCATCAATCA GGCCGGGTAC GTCATTCACA GCGCCATCCA CCGCGCACGG CCTGATCTCA AGGCTGTGCT GCACACCCAT ACTCGCGACG GCGCGGCTGT GTCCGCCCAG CGCGACGGGT TGCTGCCGAT CTCCCAGCAC GCCTTGGCCT ACTACAGCCG CGTGGTTTAC CACGACTACG AAGGCGTCGC CCTGGACCTG GACGAGCAAG CACGGCTGGT GGCCAATCTG GGCGACAGCA ACATTCTTAT TTTGCGCAAC CACGGGCTGC TGACCGGAGG TGTCAGCGTG GAACACGCGT TCCGTGAGCT GCACGGGCTG GAGCGGGCCT GCAACATCCA GATCGCCGCC CAGGCCGGGG GCAACGACCA ACTGTTACAT GCCTCAAAGG CGGCGATTGT CAAGGTGCAT GAGCAGTCCA AGCGGTTTTC CGATGGCCAG GGGGAAGGTA TCCAACGGCA TTGGGATGCG CTGATTCGGC AGTTGGATCG CGAGGGCCTC GATTACCAGG ACTGA
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Protein sequence | MSSLSAFTTS TCNVRDRVSA EEWEVRVKLA AAYRLAALLR WTDHIYTHFS VRVPGPHEHF LINAFGLLFD EITASNLVKV DVDGAIIDDP LGLGINQAGY VIHSAIHRAR PDLKAVLHTH TRDGAAVSAQ RDGLLPISQH ALAYYSRVVY HDYEGVALDL DEQARLVANL GDSNILILRN HGLLTGGVSV EHAFRELHGL ERACNIQIAA QAGGNDQLLH ASKAAIVKVH EQSKRFSDGQ GEGIQRHWDA LIRQLDREGL DYQD
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