| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3223 |
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| Symbol | |
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| ID | 1046869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 3658243 |
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| End bp | 3659862 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637146644 |
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| Product | ABC transporter, periplasmic binding protein |
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| Protein accession | NP_745366 |
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| Protein GI | 26989941 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.680403 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCAC TGCACCAACT GCTCGCGATC GGCACCCTGG CCCTGGGCCT CACCGCTTGC
TCGCCGGCCG ACAACACCTC AACCAGCAAG ACCCTCAACA TCGCCTTCTG GGGTGACAAC
ACCACGCTGG TCAGCGTCGA CCCCTTTCAG GTCTACTGGC TCGAACACCG CGTGCTGCTG
CGCAACGTCG TCGAGTCGCT CACTGACCAA GACCCGCAGA CCGGTCGCAT CATCCCGTGG
CTGGCGAAAA CCTGGGAGGT CGGTGCCGAT GCCCTGAGCT ATACCTTCCA CCTGCGCGAG
GACGTCACCT TCAGCAACGG CGAACGCTTC GATGCTCACG CCGTGAAAAC TGCCTTCGAC
AGCAACAAAG CGTTCGCCAG CCAGTTGCCG GCCACCTTCG GTGCCACCTA CCTGGCCGGC
TACGACCACG CCGAGGTGAT CGACGACTTC ACCGTGCGCC TGGTCCTGGC AAAACCCAAC
GCGGGTTTCC TTCAGGCCAC GTCCACCACC AACCTGGCCA TTCTCGCCCC GGCCTCGTAC
CGGTTGAGCG CGCAGCAACG CTCGCTGGGC AAGATCATCG GTACCGGGCC ATTCACCCTC
GATCACTACA CCCCGGAGGT CGGCGCACGC CTGCTCAAGC GTGCCGATTA CGCCTGGCCC
TCGGCCAATG TGCGCAACCA GGGCGCGGCG TACCTGGATG CCGTGGACAT CAGCTACATC
CCCGAAGAGA GTGTGCGCAA CGGCCTGTTC CTGCAAGGCA AGGTCGACAT CCTGTGGCCA
CGCAACCCGT TCTCGGAAGT TGACCTGCAG CTGTTTCAGT CCAAGGGCGC GACCATCCAG
AGCCGTTCGC TGCCAGGCCC GGCGATGAAC CTCTACCCCA ATACCCGCAA CGACCGCCTG
CTCGGTGACC GCCAAGTGCG CCTGGCGCTG CAGAAGGCCA TCGACCGCAC CAGCTACGCG
CACACCGTCT ACAACACTGC GTTCCCGGTG GTGAGTGGCG TATACGACGT CACCACACCG
TTCTTCAAAG CCCAAACCGA CAAGCTCGCC TACGACCCCA AAGGTGCCGA GCAACTGCTC
GACGCCGCTG GCTGGCACAA AGGCGACGAC GGCTACCGGC ACAAGAACGG CCAGCGCCTG
ACGCTGCGCT ACAACCTCAC ACCCGCCGAA AGCGCCGGTG ACGTGCTGGT ACAGGACCAA
CTGCGCAAAG TGGGCATCGA CCTCAAACTG AACGTACTGA CCCGCGCCGA ATGGGTGACC
GGCAATTCGA CAGGCGCCTA CGACCTCACC TCCACCTACA TGACCCGCGC CGACCCGATC
ATCCTGCAGA CCATCCTCGA CCCGCGCGCC GCCAACAGCG CCACGCTCGC CACCAACACC
TACGAGCCCG ACACCCTGGC CAAAGCTCAG GCGCTGTTCG ACAGCGGTAT CACCGCCACT
GCCGACACGC AACGGGCCCA GGCCTACGGC CAACTGCAGG ACCTGCTGGT CGACGAAGCG
TCGGCGTTCC CGCTGTACGA GCGCGTCTGG CAGGCCGCCA CCGCGCCGCG GGTCAAGCAC
TTCCACTGGA CCGCCGAAGG CTTCGCCCTG CTCAGTGACA TCCAGGTCGG CCAGCCATGA
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| Protein sequence | MPPLHQLLAI GTLALGLTAC SPADNTSTSK TLNIAFWGDN TTLVSVDPFQ VYWLEHRVLL
RNVVESLTDQ DPQTGRIIPW LAKTWEVGAD ALSYTFHLRE DVTFSNGERF DAHAVKTAFD
SNKAFASQLP ATFGATYLAG YDHAEVIDDF TVRLVLAKPN AGFLQATSTT NLAILAPASY
RLSAQQRSLG KIIGTGPFTL DHYTPEVGAR LLKRADYAWP SANVRNQGAA YLDAVDISYI
PEESVRNGLF LQGKVDILWP RNPFSEVDLQ LFQSKGATIQ SRSLPGPAMN LYPNTRNDRL
LGDRQVRLAL QKAIDRTSYA HTVYNTAFPV VSGVYDVTTP FFKAQTDKLA YDPKGAEQLL
DAAGWHKGDD GYRHKNGQRL TLRYNLTPAE SAGDVLVQDQ LRKVGIDLKL NVLTRAEWVT
GNSTGAYDLT STYMTRADPI ILQTILDPRA ANSATLATNT YEPDTLAKAQ ALFDSGITAT
ADTQRAQAYG QLQDLLVDEA SAFPLYERVW QAATAPRVKH FHWTAEGFAL LSDIQVGQP
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