Gene PP_3186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3186 
Symbol 
ID1046832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3614775 
End bp3615434 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content65% 
IMG OID637146608 
Producttranscriptional activator, TenA family 
Protein accessionNP_745330 
Protein GI26989905 
COG category[K] Transcription 
COG ID[COG0819] Putative transcription activator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCT TCGAGCGCCT CAAGGCCGCT GCCACGCCAC AATGGAACCG CTACGTAGAC 
CATGACTTCG TGCGGCAGAT GGGCGCAGGC ACGCTGAGCG AGGAAGCGTT CCGTACCTAC
CTTGTGCAGG ATTACCTGTT CCTGATCCAG TTCGCCCGCG CCTGGGCGTT GGCCGCCTAC
AAAAGCCGCC GCCCGGCCGA CATTCGTGCG GCGCAGGCCG GGCTGTCGGC GATCCTGGAT
GAAACCGAGC TGCACTTGCG ACTGTGCGCG CGCTGGGGCT TGACCCAGGC AGACATCGAG
GCCGCGCCAG AGCATCAGGC CACGGTGGCA TACACCCGTT ATGTGCTGGA CTGCGGCGCA
GCGGGCGATC TGCTGGAGCT GCATGTGGCA CTGGCACCTT GCGTGATCGG CTATGCCGAA
ATCGGCCGGA CCCTGGCCGA GCGCATTGGC GACTTGAGCA ATCACCCCTA CCGCGAGTGG
ATTGGCGAGT ATGCCGGGGA GGGCTACCAA GGGGTGGCCG CAGCAGCGCG CAAGCACCTG
GATGAACTGG CCGCGCGCAG CATGACCGAG CAGCGGTTCG CCGAACTGGC AGGGATTTTT
GGCCAGGCCT CCAGCCTGGA GGCGGATTTC TGGCAAATGG GGTTGGACGG GACCGTGTAA
 
Protein sequence
MDIFERLKAA ATPQWNRYVD HDFVRQMGAG TLSEEAFRTY LVQDYLFLIQ FARAWALAAY 
KSRRPADIRA AQAGLSAILD ETELHLRLCA RWGLTQADIE AAPEHQATVA YTRYVLDCGA
AGDLLELHVA LAPCVIGYAE IGRTLAERIG DLSNHPYREW IGEYAGEGYQ GVAAAARKHL
DELAARSMTE QRFAELAGIF GQASSLEADF WQMGLDGTV