Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3186 |
Symbol | |
ID | 1046832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3614775 |
End bp | 3615434 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637146608 |
Product | transcriptional activator, TenA family |
Protein accession | NP_745330 |
Protein GI | 26989905 |
COG category | [K] Transcription |
COG ID | [COG0819] Putative transcription activator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATCT TCGAGCGCCT CAAGGCCGCT GCCACGCCAC AATGGAACCG CTACGTAGAC CATGACTTCG TGCGGCAGAT GGGCGCAGGC ACGCTGAGCG AGGAAGCGTT CCGTACCTAC CTTGTGCAGG ATTACCTGTT CCTGATCCAG TTCGCCCGCG CCTGGGCGTT GGCCGCCTAC AAAAGCCGCC GCCCGGCCGA CATTCGTGCG GCGCAGGCCG GGCTGTCGGC GATCCTGGAT GAAACCGAGC TGCACTTGCG ACTGTGCGCG CGCTGGGGCT TGACCCAGGC AGACATCGAG GCCGCGCCAG AGCATCAGGC CACGGTGGCA TACACCCGTT ATGTGCTGGA CTGCGGCGCA GCGGGCGATC TGCTGGAGCT GCATGTGGCA CTGGCACCTT GCGTGATCGG CTATGCCGAA ATCGGCCGGA CCCTGGCCGA GCGCATTGGC GACTTGAGCA ATCACCCCTA CCGCGAGTGG ATTGGCGAGT ATGCCGGGGA GGGCTACCAA GGGGTGGCCG CAGCAGCGCG CAAGCACCTG GATGAACTGG CCGCGCGCAG CATGACCGAG CAGCGGTTCG CCGAACTGGC AGGGATTTTT GGCCAGGCCT CCAGCCTGGA GGCGGATTTC TGGCAAATGG GGTTGGACGG GACCGTGTAA
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Protein sequence | MDIFERLKAA ATPQWNRYVD HDFVRQMGAG TLSEEAFRTY LVQDYLFLIQ FARAWALAAY KSRRPADIRA AQAGLSAILD ETELHLRLCA RWGLTQADIE AAPEHQATVA YTRYVLDCGA AGDLLELHVA LAPCVIGYAE IGRTLAERIG DLSNHPYREW IGEYAGEGYQ GVAAAARKHL DELAARSMTE QRFAELAGIF GQASSLEADF WQMGLDGTV
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