Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3156 |
Symbol | |
ID | 1046805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3575596 |
End bp | 3576486 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637146578 |
Product | universal stress protein |
Protein accession | NP_745300 |
Protein GI | 26989875 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.318164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGT TCAAACGTCT GTTCGTCATG CTCGGCCCGC AAATGCGTCA TACGCCTGCG CTGCAACGCG CGGCGGCGTT GGCAGAGTCC AGCGGTGCCC TGCTGGATAT CAATGTGTTC GTCGACGACG TCGACACCTT TGGCTTGATG AGCGATGGTC GTGAGCGTGA ACGGCTGCTC AGCGACAACC GCCAATGGCT GGCGGATGAG GCCGAACAGC TGAGCGATGC CGGTGTGGAC GTATCCACCG AGCTGTTGTT GACCCGCGAC CCGCTGGGCA GCGTACTGGA ACGGGTCGAA CGGCTGGGCT GCGATCTGTT GGTCAAGGAC GTACAGCACG AGCCCGTACT CAAACGCCTG CTGGTCACGC CGCTGGACTG GCAGTTGCTC AAGGACAGCC CGGTCGCCGT GCATCTGGTC AGCGACATTC GCCTGCCCCT GCCACGGCAG ATCGCCGCCA CGGTGGACCT GAACAGCCAT GGCGCTGGCG AGCACCTGGA CGAGCAGGTC ATCCACTGCG CCCATGACCT GGCCCTGCAG TGCAACGCCG AACTGCACCT GCTGCATGTG TGCGACGCGG CCAAGACCCA CATCGCCGAC TTCGGCGCCG GTACGGTCAC CATGCCCGGC TTCGACAGCA GTGTGCGAAC CGCGCAGCGG GCTGCGTTCA ACCGCCTGGG CGACCATCAC CAGATCCCGC TGGAGCGCCG GCACTTCCTC GAAGGGGCCG CGATCAGGGC CATTGCCCAG TTCGTCGGCC ACAACCGGGT GGACGTGATC GTCATGGGCA GCCACCGGCA TGACGCCATG CAGACATTCC TCGGCGGGAC AACGGCGCAT GTGCTGGAAC ACCCGCTGTG CAATGTGTTG GCGATCAAGG CTGTTCGCTG A
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Protein sequence | MSQFKRLFVM LGPQMRHTPA LQRAAALAES SGALLDINVF VDDVDTFGLM SDGRERERLL SDNRQWLADE AEQLSDAGVD VSTELLLTRD PLGSVLERVE RLGCDLLVKD VQHEPVLKRL LVTPLDWQLL KDSPVAVHLV SDIRLPLPRQ IAATVDLNSH GAGEHLDEQV IHCAHDLALQ CNAELHLLHV CDAAKTHIAD FGAGTVTMPG FDSSVRTAQR AAFNRLGDHH QIPLERRHFL EGAAIRAIAQ FVGHNRVDVI VMGSHRHDAM QTFLGGTTAH VLEHPLCNVL AIKAVR
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