| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_3143 |
|---|
| Symbol | |
|---|
| ID | 1046789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 3559155 |
|---|
| End bp | 3560096 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637146565 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | NP_745287 |
|---|
| Protein GI | 26989862 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGACGAC AACTCAATGG TCAGATGTTC GTCTGGCTGC ATGTATTTGC CTGCGCAGCC
CGGCACCTGT CCTTCACCCG CTGTGCCGAA GAGCTGCACA TCACCCCGGG CGCGGTCAGC
CAGCAGATGC GCCAACTGGA AGAGCGCCTG GGCTACCGGC TGTTCCTGCG CCGGGCGCGC
GGCGTGGAGC TGAGCGCCGA GGGGCAACGC CTGGCCCAGA CGGTGGCCGA GGCCTACGGC
AGTATCGAAG CCGAGCTGCT GCGGCTGGAC GCGGGGGAAA TCCGCGGCAC ATTGCGTGTG
CGTTCGATCC CGTCGTTCCT GGCCAAATGG CTCACGCCGC GCTTGCCGCG TTTTCAACAA
CGTTACCCGG ACATCGAGTT GCGCCTGGTG GCTGAGGACA GTGCCCAGGC GCTGACGCCG
GGCGACTTCG ACCTTGCCAT CGACCTGAAC GATGGCAGTT ACCCAGGCAT GCTCTCGACG
CCGCTGCTGG ACGAGCAGAT CTTCCCGGTG TGCTCACCTG CCCTGCTGCG CGGGCGCCCG
CCGCTGCATG GCCCCGCTGA CCTGGCGCAC TACCCGCTGC TGCATGACAT CACCGCCTGG
CGTGGCAGTT CGGAATATGC CGAGTGGGAG TTCTACCTGG AAGGCATCGG CGCCGCCGGC
CTGGATGTGC GGCGCGGTCA CACCTTCAAC CGCAACCACC TGACCATCGA GGCGGCTATT
GCCGGTATCG GCGTGGCGAT TGCCCGCCGC ACGCTGCTCA ATGATGAACT GGAACGCGGG
GCACTGATCG TGCCGTTTGG TGTACCGATC GCCAACCACA AGCGTTATGT GGTGCATTAC
CCGCCAGGCG GCTTGAACCA GCCAGGTGCG CGGGCGGTGC ATGACTGGCT GGTGGAAGAA
GCGCGGGGGT TCAGGGTGTT GCATCCGTTG AACAAGGAAT AA
|
|---|
| Protein sequence | MRRQLNGQMF VWLHVFACAA RHLSFTRCAE ELHITPGAVS QQMRQLEERL GYRLFLRRAR
GVELSAEGQR LAQTVAEAYG SIEAELLRLD AGEIRGTLRV RSIPSFLAKW LTPRLPRFQQ
RYPDIELRLV AEDSAQALTP GDFDLAIDLN DGSYPGMLST PLLDEQIFPV CSPALLRGRP
PLHGPADLAH YPLLHDITAW RGSSEYAEWE FYLEGIGAAG LDVRRGHTFN RNHLTIEAAI
AGIGVAIARR TLLNDELERG ALIVPFGVPI ANHKRYVVHY PPGGLNQPGA RAVHDWLVEE
ARGFRVLHPL NKE
|
|---|
| |