Gene PP_3129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3129 
SymbolgalE 
ID1046777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3541754 
End bp3542719 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content63% 
IMG OID637146551 
ProductUDP-glucose 4-epimerase 
Protein accessionNP_745273 
Protein GI26989848 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1087] UDP-glucose 4-epimerase 
TIGRFAM ID[TIGR01179] UDP-glucose-4-epimerase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.86735 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATC TGGTTGTGGG TGGTGCGGGC TACATTGGCT CGCACATGGT CAAGCACCTG 
CTCGCCGCCG GCCATGAAGT GCTGGTGGCG GACCTGGTCT CACCTGGCCC CGGTATCCAG
TGGGCCAAGC TCGACATCGC CGACGAAGCC GCACTGGATG TGCTGTTTGG CGTGTGTCGC
TTCGATGCGG TGTTCCACTT CGCCTCGTTC ATTCAAGTGG GCGAGTCGGT CAGTGCCCCC
GGCAAGTACT ACCAGAACAA CGTCGCAGCC ACCCTTTCCC TGCTGCAGGC CATGGTCAAT
GCCGGCATCA GGCACCTGGT GTTTTCTTCG AGTGCCGCCG TATACGGCAA CCCGCAGTAC
GTGCCGATCG ATGAAGCACA CACCAAGGGG CCGATCAACC CGTATGGGTT GAGCAAATGG
ATGGTCGAGC AGATTCTTGA GGACTTCGAC CGGGCCTATG GTTTGAAGTC GGTAAGCCTG
CGCTATTTCA ATGCAGCGGG CGCTGACCCG GAAGGCCAGC TAGGCGAGCG TCACGAGCCG
GAAACCCATC TGATCCCGTT GATCCTGCAG GCTGCATCTG GCCGGCGCGA GGCGGTGACA
GTGTTTGGTC GCGACTACGA CACGCCGGAT GGCACCTGCA TACGCGACTA CGTGCATGTG
GCAGACCTGG CGGCTGCCCA TGCACTGGCA GTGGATTATC TACTGGACGG TGGCGAGCGT
GCCGCGTTCA ACCTGGGCAA TGGCCTGGGC TTTTCGGTGC AGCAGGTGAT CGATACGGCC
CGGGCCGTGA CCGGGCGACA GATCACTGCC CTTGACGCAC AGCGCCGCGC CGGCGACCCG
CCACGGCTGG TGGCGGATGC GAGCAAGGCC ATGCAGGTGC TGGGCTGGCG CCCTGCATTC
GCCTCACTGG AGCAGATTGT GCGGCATGCG TGGCAGTGGG AGTTGCAGTA TCCCTGGAGG
CGCTGA
 
Protein sequence
MKYLVVGGAG YIGSHMVKHL LAAGHEVLVA DLVSPGPGIQ WAKLDIADEA ALDVLFGVCR 
FDAVFHFASF IQVGESVSAP GKYYQNNVAA TLSLLQAMVN AGIRHLVFSS SAAVYGNPQY
VPIDEAHTKG PINPYGLSKW MVEQILEDFD RAYGLKSVSL RYFNAAGADP EGQLGERHEP
ETHLIPLILQ AASGRREAVT VFGRDYDTPD GTCIRDYVHV ADLAAAHALA VDYLLDGGER
AAFNLGNGLG FSVQQVIDTA RAVTGRQITA LDAQRRAGDP PRLVADASKA MQVLGWRPAF
ASLEQIVRHA WQWELQYPWR R