Gene PP_3125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3125 
Symbol 
ID1046773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3536360 
End bp3536902 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content61% 
IMG OID637146547 
ProductCro/CI family transcriptional regulator 
Protein accessionNP_745269 
Protein GI26989844 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.888864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTATCC GATTGAAACT GCTGCGTAAG AAACTGGGGA TGACCCTGGA AATGCTGGCC 
GAAAAGACTG GCATGACCAA AAGCTACCTG TCCAAGGTCG AGCGCGGCCT CAACACGCCC
TCGATCGCTG CGGCGCTGAA ACTGGCGAGG GCGCTGAACG TCAATGTCGA AGAGCTCTTC
GCCGAAGAGC AGGCCGGGCA GAGCCGCTAC AGCCTGGTGC GCCGTACCGA GCGCCAGGCC
CTGGTTGGCG ATGGGCAAGG GCCGGGGTAC GCGGCCCTCA CCAGTCAGAT TGGCCAGCGC
AGCCTGCTGC CGTTTCTGAT TCAGCCGCCG TCCGAGTTCA GCGACCCTAC GTTCAAGGAA
CACCAGGGCG AAGAGTTCCT GTTTGTTCAC ACAGGCCAGG TGGAAGTGGA TTTCATGAGT
GAGCGGGTGT TGCTGGAGCA GGGCGACGCC CTGCATTTCA ACGCCCAGAC ACCGCACCGG
CTGCGCTCGG TAGGTGTGAC GCCGGCGCAG TTACTGGTTG TTGTTCACCA CGCAGACGAA
TGA
 
Protein sequence
MSIRLKLLRK KLGMTLEMLA EKTGMTKSYL SKVERGLNTP SIAAALKLAR ALNVNVEELF 
AEEQAGQSRY SLVRRTERQA LVGDGQGPGY AALTSQIGQR SLLPFLIQPP SEFSDPTFKE
HQGEEFLFVH TGQVEVDFMS ERVLLEQGDA LHFNAQTPHR LRSVGVTPAQ LLVVVHHADE