Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3120 |
Symbol | |
ID | 1043969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3531465 |
End bp | 3532226 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637146542 |
Product | aldo/keto reductase family oxidoreductase |
Protein accession | NP_745264 |
Protein GI | 26989839 |
COG category | [R] General function prediction only |
COG ID | [COG0656] Aldo/keto reductases, related to diketogulonate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00828042 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0825689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGAAG ACCCAGGTCG CAAGGCTGCC GAAGTCGCGG CGCTGCAACA GGGCATCGAG CTGGGCCTGA ACCTGATCGA CACCGCCGAG ATGTATGCCG AAGGGGGGGC AGAAGAGGTC GTTGGCCAAG CCATTGCCGG GCGCCGCGAC CGGGTATTTC TGGTCAGCAA GGTCTACCCG CACAATGCCA GCCTGCGCGG CATGGCGGCA GCCTGCGAGC GCAGCCTCAC TCGGCTGGGC ACCGATTGCA TCGACTTGTA CCTGCTGCAC TGGCGTGGTC AGCACCCGCT GGAGGAAACC GTCGAAGGCT TCGAGCGCTT GCGCGAGCAA GGCAAGATCA AGCGTTGGGG CGTGTCCAAC TTCGACGTCG ACGACCTGCG CGAACTGCAC AACCCTGATT GTGCCACCAA CCAGGTGTTG TACAACCCGG CCCAACGCGG CATCGAATTC GACTTGCTAC CGTGGTGCGG AAAACGTGGC TTGCCAACCA TGGCCTACTG CCCGCTGGCG CAGGCCGGGC GCTTGTTGCA GCACCCGGTA CTGGCGGAAA TCGCCGAGCG CCATGGCGCC ACACCGGCCC AGGTCTGCCT GGCCTGGGTG ACCCGCGATG ACGGCGTGAT CGCCATCCCC AAGGCGGTGG CGCCCGAGCA CGTGCGGCTC AATGCGGCGG CGGGAGCGCT GACCTTGACC GGTGAAGACC TGCGGGCGAT CGACCGGGCG TTCCCTGCAC CGACGCGCAA GCAGCGGTTG GCGATGGTGT AG
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Protein sequence | MGEDPGRKAA EVAALQQGIE LGLNLIDTAE MYAEGGAEEV VGQAIAGRRD RVFLVSKVYP HNASLRGMAA ACERSLTRLG TDCIDLYLLH WRGQHPLEET VEGFERLREQ GKIKRWGVSN FDVDDLRELH NPDCATNQVL YNPAQRGIEF DLLPWCGKRG LPTMAYCPLA QAGRLLQHPV LAEIAERHGA TPAQVCLAWV TRDDGVIAIP KAVAPEHVRL NAAAGALTLT GEDLRAIDRA FPAPTRKQRL AMV
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