Gene PP_3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3112 
Symbol 
ID1043942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3522417 
End bp3522845 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content67% 
IMG OID637146534 
Producthypothetical protein 
Protein accessionNP_745256 
Protein GI26989831 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.472591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.561703 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGGTT CATGGAGCGC TTACGAGCCA ATGCCAGGCC TGTTGCGCCT GCTGGAGCAT 
GCCCAGGCCC ATGGCATCGG CATGTGCGTG GTGACCAACG CACCGCGGCT GAACGCCGAG
CACATGCTGA ACGCCATGGG CCTGGGCCAG CACTTTGAAC ATGTGCTGGT GGCCGAAGAG
CTGGCACGGC CCAAACCGGA CCCGCTGCCC TACCTCACCG GCCTGCAGCG GCTGGGTGTC
GAGGCCGGGC AAGCGCTGGC CTTCGAGGAC TCATTGCCGG GGACGGCCGC GGCCAGTGGC
GCGGGGATCT TTACCGTGGG CGTGGCCACG ACGCAGACCC CGGAGCGGTT GCTGGCGGCG
GGCGCCAGGC TGGTTGTCGA CGATTTCAAT GATGCAGCGT TGTGGGCGTT GATCGAGCGT
ATGGCTTGA
 
Protein sequence
MWGSWSAYEP MPGLLRLLEH AQAHGIGMCV VTNAPRLNAE HMLNAMGLGQ HFEHVLVAEE 
LARPKPDPLP YLTGLQRLGV EAGQALAFED SLPGTAAASG AGIFTVGVAT TQTPERLLAA
GARLVVDDFN DAALWALIER MA