Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3088 |
Symbol | |
ID | 1043811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3476877 |
End bp | 3477962 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637146510 |
Product | hypothetical protein |
Protein accession | NP_745232 |
Protein GI | 26989807 |
COG category | [S] Function unknown |
COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03363] type VI secretion-associated protein, ImpA family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAAA TTCTCAATGA CCTCTCGCTG GCCACACTGG TCGCCCCTAT CGAGGGTGGC AGTGGCGAAG ACTTGAGCTT CTCTGCCTTG TTCGATCAGA TCAAGGAGGC ACGCCGGGCG GACCCTGACT ACCTGACCCA GGGCGACTGG CAAACCGACT TGAAGACTGC CGACTGGGAG CAGGTGATCA ACCTGTCGGC TCAAGGGCTT GCGCAGCAAA GCAAAGACCT GATGCTGGTG GCCTGGCTCT GCGAGGGGCT GGCCCAGCGT GAACACTTCG AAGGCATCAC CTTTGGCCTC GAGCTGACCG AACAGCTCCT GGTTGCGTTC TGGGAAACAC TGTACCCCAC CCTCGAAGAC GGCCTGGACG AGCGCGCGGC GCGACTGTCC TGGCTGAAGA CCACGCTCAC CGACATTGCC GGTGGCTTGC CCATTATCCA GGGGCAGAAT TTTGGCGTGT TGCGCTATGA CGAATCACGC CATGTAGAGA ACCTCGCCTT GCAAAACCCC AAGGCGATGC AGACAGCACT GAACGAAGGC AAGATCAACG CCGAGATCTT CCAGCGCTCG GTAGCGCTTA CCGACACCGA TTACCTGCGC GCCAAGGCGC AGCAGATCGC TACCAGCCTG AATGCATGCA AACGCCTGCA GGCCAGCGCC GACCGCCTGT TCGGCCACGA GGCGCCCAGC TTTGCCAGCC TTGCCGACAT GCTTTCGCGT GCCAGCCAGC TGGCGGAAAA ACTGCTCAAG GACCGCGGCG TAGAGCTACA CCCCGCCATC CCGGAAGAAG CACAGCCACA GGCCATGGCT GCCAACCTCC ACGAAGCAGG TGAGCCGATG AATGCCACGC CCCCGACGAC CGCGCCTGCA GCCCTGCGCA CCACCCCGCT GACCCGCGAC GAGGCATTCA CCATGCTTGC GGGCATCGCC CAGTACTTCA AACAGAGCGA ACCGCAAAGC CCGGTACCCT ACCTGATCGA ACGTGCGATC AAGTGGGGCA ACATGCCGTT GGAAGGCTGG TTGAGTGACG TGATCAAGGA CAACAATGTG GTGGACAACA TCCGCGATGT GCTGGGCACC CGCTAG
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Protein sequence | MPEILNDLSL ATLVAPIEGG SGEDLSFSAL FDQIKEARRA DPDYLTQGDW QTDLKTADWE QVINLSAQGL AQQSKDLMLV AWLCEGLAQR EHFEGITFGL ELTEQLLVAF WETLYPTLED GLDERAARLS WLKTTLTDIA GGLPIIQGQN FGVLRYDESR HVENLALQNP KAMQTALNEG KINAEIFQRS VALTDTDYLR AKAQQIATSL NACKRLQASA DRLFGHEAPS FASLADMLSR ASQLAEKLLK DRGVELHPAI PEEAQPQAMA ANLHEAGEPM NATPPTTAPA ALRTTPLTRD EAFTMLAGIA QYFKQSEPQS PVPYLIERAI KWGNMPLEGW LSDVIKDNNV VDNIRDVLGT R
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