Gene PP_3005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_3005 
Symbol 
ID1043105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3399329 
End bp3400030 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content66% 
IMG OID637146427 
Producthypothetical protein 
Protein accessionNP_745149 
Protein GI26989724 
COG category[S] Function unknown 
COG ID[COG5343] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.660261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0479294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGGAA TGAAGCCCGA TTCTGCCGAA GAACTGGACA GCCTCGCCGG GGAATACGTG 
CTGGGAACCT TGTCGCCGGA GCAATATGCC GTAACGGCCG AACGCCTGCG TACCGACCCC
GCGCTTCGCG CCGCCGTGGA TGCCTGGGAG GCCCGGCTGC TGGAACTGAC CGCGCTGTCT
ACCCCGCAGC CCCCTAGCCC CCGCCTGTGG CGCCGTATCC AGCGCAGCCT CGACGAGCTA
CCCGCACCGC GCATGCAGGC TCGCTGGTGG CAACGCCTCG GCCTGTGGCA AGGGCTCAGC
GCCGCGGGGC TGGCGGCAAG CCTGCTGCTG GCGTTTACCT TGCTGACCAC GCCCGCCTCT
ACCACGGAAT ATCTGGTGGT GCTGGTGGCG CCGAACAGCC AGGCCCCCGG CTGGGTGGTG
CAGGCCAGCG ACAGCCACAT GATCGAACTG CTGCCGCTGG GTAAGGACAA GGTCCCCGAC
GGCATGGCCC TGCAGTTCTG GACCAAGGGC GAGCAATGGC GTGCCCCGGT TTCGCTTGGC
CTGGTCAAAC CGGGCGAACC CTATCGAGTT CCGCTGGAAA GTTTGCCACC CCTGGAGGCC
AATCAACTGT TCGAGCTGAC GCTGGAGAAA GCCGGTGGCT CGCCGACCGG TCTGCCGACA
GGGCCGGTGA AGTTCATTGG TCGCGCGGTG AAAGTGATAT GA
 
Protein sequence
MSGMKPDSAE ELDSLAGEYV LGTLSPEQYA VTAERLRTDP ALRAAVDAWE ARLLELTALS 
TPQPPSPRLW RRIQRSLDEL PAPRMQARWW QRLGLWQGLS AAGLAASLLL AFTLLTTPAS
TTEYLVVLVA PNSQAPGWVV QASDSHMIEL LPLGKDKVPD GMALQFWTKG EQWRAPVSLG
LVKPGEPYRV PLESLPPLEA NQLFELTLEK AGGSPTGLPT GPVKFIGRAV KVI