Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3005 |
Symbol | |
ID | 1043105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3399329 |
End bp | 3400030 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637146427 |
Product | hypothetical protein |
Protein accession | NP_745149 |
Protein GI | 26989724 |
COG category | [S] Function unknown |
COG ID | [COG5343] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.660261 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0479294 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCTGGAA TGAAGCCCGA TTCTGCCGAA GAACTGGACA GCCTCGCCGG GGAATACGTG CTGGGAACCT TGTCGCCGGA GCAATATGCC GTAACGGCCG AACGCCTGCG TACCGACCCC GCGCTTCGCG CCGCCGTGGA TGCCTGGGAG GCCCGGCTGC TGGAACTGAC CGCGCTGTCT ACCCCGCAGC CCCCTAGCCC CCGCCTGTGG CGCCGTATCC AGCGCAGCCT CGACGAGCTA CCCGCACCGC GCATGCAGGC TCGCTGGTGG CAACGCCTCG GCCTGTGGCA AGGGCTCAGC GCCGCGGGGC TGGCGGCAAG CCTGCTGCTG GCGTTTACCT TGCTGACCAC GCCCGCCTCT ACCACGGAAT ATCTGGTGGT GCTGGTGGCG CCGAACAGCC AGGCCCCCGG CTGGGTGGTG CAGGCCAGCG ACAGCCACAT GATCGAACTG CTGCCGCTGG GTAAGGACAA GGTCCCCGAC GGCATGGCCC TGCAGTTCTG GACCAAGGGC GAGCAATGGC GTGCCCCGGT TTCGCTTGGC CTGGTCAAAC CGGGCGAACC CTATCGAGTT CCGCTGGAAA GTTTGCCACC CCTGGAGGCC AATCAACTGT TCGAGCTGAC GCTGGAGAAA GCCGGTGGCT CGCCGACCGG TCTGCCGACA GGGCCGGTGA AGTTCATTGG TCGCGCGGTG AAAGTGATAT GA
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Protein sequence | MSGMKPDSAE ELDSLAGEYV LGTLSPEQYA VTAERLRTDP ALRAAVDAWE ARLLELTALS TPQPPSPRLW RRIQRSLDEL PAPRMQARWW QRLGLWQGLS AAGLAASLLL AFTLLTTPAS TTEYLVVLVA PNSQAPGWVV QASDSHMIEL LPLGKDKVPD GMALQFWTKG EQWRAPVSLG LVKPGEPYRV PLESLPPLEA NQLFELTLEK AGGSPTGLPT GPVKFIGRAV KVI
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