Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_3002 |
Symbol | aroE-2 |
ID | 1043090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3397517 |
End bp | 3398335 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637146424 |
Product | shikimate 5-dehydrogenase |
Protein accession | NP_745146 |
Protein GI | 26989721 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.526798 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0484515 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACC GCTACGCAGT GATCGGCCGA CCGATCAACC ACACCAAGTC CCCGCTGATT CATGGCCTGT TCGCCCAGGC CAGCAACCAG CAGCTGGAAT ACGGGGCTAT CGAAGGCTCG CTGGACGACT TCGAAGCCCA GGTACTGCAG TTTCGTAGCG AAGGCGGGAA GGGCATGAAC ATCACCGCCC CGTTCAAGCT GCGTGCCTTC GAGCTGGCCG ACCGGCGCAG CGAGCGGGCG CAATTGGCAC GGGCGGCCAA TGCGCTGAAG TTCGAGGATG GCCGCATCGT CGCCGAAAAC TTCGATGGCA TCGGTTTGCT GCGGGACATC GAGGAGAACC TTGGCGAGCC GCTGCGCAAC CGCCGTGTGC TGCTGCTGGG TGCTGGCGGC GCGGTGCGCG GGGCGTTGCT GCCGTTCCTG CAGGCGGGGC CTAGCGAGCT GGTGATCGCC AACCGGGACA TGGCCAAGGC GCTGGCGCTG CGTAACGAGC TCGATCACTC GCGTCTGCGC ATCAGCCGCT ACGAAGCGCT GGAAGGGCAA TCGTTCGACA TCGTCGTCAA CGCCACCTCG GCGAGCCTGA CCGCGGACTT GCCGCCCCTG CCGGCTGATG TGCTGGGCGA GGCGGCCTTG GCCTACGAGC TGGCCTATGG CAAAGGCCTC ACGCCTTTCC TGCGCCTGGC TCGCGAGCAG GGCCAGGCGC GCCTGGCCGA TGGCGTCGGC ATGCTGGTGG AGCAGGCCGC CGAGGCGTTT GCCTGGTGGC GCGGGGTGCG GCCCGACACA CGTGCGGTGA TCAATCAGCT GACGATTCCC TTGGAGTAG
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Protein sequence | MSDRYAVIGR PINHTKSPLI HGLFAQASNQ QLEYGAIEGS LDDFEAQVLQ FRSEGGKGMN ITAPFKLRAF ELADRRSERA QLARAANALK FEDGRIVAEN FDGIGLLRDI EENLGEPLRN RRVLLLGAGG AVRGALLPFL QAGPSELVIA NRDMAKALAL RNELDHSRLR ISRYEALEGQ SFDIVVNATS ASLTADLPPL PADVLGEAAL AYELAYGKGL TPFLRLAREQ GQARLADGVG MLVEQAAEAF AWWRGVRPDT RAVINQLTIP LE
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