Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2992 |
Symbol | |
ID | 1043014 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3389685 |
End bp | 3390506 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637146414 |
Product | hypothetical protein |
Protein accession | NP_745136 |
Protein GI | 26989711 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.152511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.155125 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTGATG GAGCTCGGAT GATGCTCAAG ACCTTTGTTT CTTATGCGTT GGTACTGATA GGTAGCGCTT TCATGACATT TGCAAATGCT GGCACCGCCG CTTCCACAAC GACTGCCAAG AATAGCCAGA TTCTGGTGAT TATGACCAAT CACGCCAGAT ATCCTTCACG CACCGATTCC ACGGGGTTGT GGCTAACTGA GCTGACGCAT TTCACCGATG TGGTGGAGGC GGCTGGCTAC AGCACAGTTT TTGCCAGTCC CAAAGGCGGT GCGGTGCCAC TGGACGAGCG CAGTCTCGGT TGGCTGTACA TGGACAAGGC CGCGCGTGAG CATTTGCAGT CCCCGGCCTT TCGCGCCCGC TTGCAGAACA CGCTGCCGAT CGCAGATATC GATCCGTCCC AGTTCGGCGT CATCTACTTC ACCGGGGGCC ATGGCGTGAT GTGGGACTTC CCCAATAATC CCGACCTGCG ACGTGTCGCC GAAACCATCT ACAACCAGGG TGGCATCGTC TCGGCCGTCT GCCATGGCGT AGCGGGCCTG CTGGATCTGA AGGATGAAAA GGGCCAGTTG ATCATCAAGG GCAAGAACAT CACCGGCTTC TCTGATCGCG AAGAACTGTT CTCCGGCATG AAAAGCCAGG TGCCCTTCTT CCTTGAGGAC AAGTTGGTGA GTCAGGGTGC TCGGTACCGC AAAGGCTGGC TGCCATTCAC GTCATTTGCC ATCACGGATG GAAGGCTTGT CACCGGCCAA AACCCTCAAT CACCCAAAGC CGTAGCTGAA GCGGTGATGG CGGTGCTCTC TGGCGACAAC GTAGCTCGCT GA
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Protein sequence | MSDGARMMLK TFVSYALVLI GSAFMTFANA GTAASTTTAK NSQILVIMTN HARYPSRTDS TGLWLTELTH FTDVVEAAGY STVFASPKGG AVPLDERSLG WLYMDKAARE HLQSPAFRAR LQNTLPIADI DPSQFGVIYF TGGHGVMWDF PNNPDLRRVA ETIYNQGGIV SAVCHGVAGL LDLKDEKGQL IIKGKNITGF SDREELFSGM KSQVPFFLED KLVSQGARYR KGWLPFTSFA ITDGRLVTGQ NPQSPKAVAE AVMAVLSGDN VAR
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