Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2905 |
Symbol | cysS |
ID | 1042809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3303362 |
End bp | 3304744 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637146327 |
Product | cysteinyl-tRNA synthetase |
Protein accession | NP_745049 |
Protein GI | 26989624 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0215] Cysteinyl-tRNA synthetase |
TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.242748 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCTTACCA TCTACAACAC CCTGAGCAAA ACCAAGGAAG TCTTCAAGCC GCTGGATGGC AACAAGGTGC GCATGTACGT GTGCGGCATG ACCGTGTACG ACTACTGCCA CCTGGGCCAT GGCCGCAGCA TGGTGGCGTT CGACCTGGTC ACCCGCTGGC TGCGCAAGAG CGGCTACGAG TTGACCTATG TGCGCAACAT CACCGACATC GATGACAAGA TCATCAACCG GGCGAACGAG AACGGCGAAA CCTTCGACGC CCTGACCGCC CGCATGATCG ACGCGATGCA CGAAGACGAG CGCCGCCTGA ACATTCTGCC GCCAGACCAG GAGCCGCGTG CCACCGACCA TATCGCCGGC ATGCACGCGA TGATCCAGAC GTTGATCGAC AAAGGGTACG CCTACGCGCC AGGCAATGGC GACGTGTACT ACCGGGTTGG CAAGTTCGTC GGCTACGGCA AGCTGTCGCG CAAGAGGATC GAAGACCTGC GTATCGGTGC ACGCATCGAG GTCGACGAAG CCAAGCAGGA CCCGCTCGAC TTCGTCCTGT GGAAGGGCGT CAAGCCGGGC GAGCCAAGCT GGGAATCGCC ATGGGGCCCG GGTCGCCCGG GCTGGCACAT CGAGTGCTCG GTCATGTCCA CCTGCTGCCT GGGCGAGAGC TTCGACATTC ACGGTGGCGG CAGCGACCTG GAGTTCCCGC ACCACGAGAA CGAGATTGCC CAGAGCGAGG CGGCCACCGG CAAGCAGTAC GCCAACGCCT GGATGCATTG CGGCATGATC CGTATCAACG GCGAGAAGAT GTCCAAGTCG TTGAACAACT TCTTCACCAT CCGCGACGTG CTCGAGAAGT ACCACCCGGA GGTGGTGCGC TACCTGCTGG TGGCCAGCCA CTACCGCAGC GCGATCAACT ACTCGGAAGA CAGCCTGCGT GACGCCAAGG GCGCGCTGGA GCGCTTCTAC CACGCCCTGC GCGGCCTGCC ACGGGTGGCG GCCAAGGGTG GCGAAGCGTT TGTCGAGCGC TTCAGCGTGG CGATGAACGA CGACTTCGGC ACCCCCGAAG CCTGTGCGGT CCTGTTCGAT CTGGTGCGCG AGATCAACCG CCTGCGCGAC AGCGACGTGG AGGCCGCTGC TGGCCTGGCC GGTCGACTGC GCGAGCTGGG TGATGTACTG GGTGTGCTGC AACTGGAGGC CGATGACTTC CTGCGTGCTG GTGCCGAAGG CAAGGTCGAT GCGGCTGAAG TCGAGGGCTT GATCCAGGCG CGCCTGAAGG CGCGTGCGGA CAAGAACTGG GCTGAGTCTG ACCGCATTCG CGATCAGCTG ACCGCCATGG GTGTAGTGCT GGAGGACAGC AAGGGCACGA CTACCTGGCG TCTGGCTGAC TGA
|
Protein sequence | MLTIYNTLSK TKEVFKPLDG NKVRMYVCGM TVYDYCHLGH GRSMVAFDLV TRWLRKSGYE LTYVRNITDI DDKIINRANE NGETFDALTA RMIDAMHEDE RRLNILPPDQ EPRATDHIAG MHAMIQTLID KGYAYAPGNG DVYYRVGKFV GYGKLSRKRI EDLRIGARIE VDEAKQDPLD FVLWKGVKPG EPSWESPWGP GRPGWHIECS VMSTCCLGES FDIHGGGSDL EFPHHENEIA QSEAATGKQY ANAWMHCGMI RINGEKMSKS LNNFFTIRDV LEKYHPEVVR YLLVASHYRS AINYSEDSLR DAKGALERFY HALRGLPRVA AKGGEAFVER FSVAMNDDFG TPEACAVLFD LVREINRLRD SDVEAAAGLA GRLRELGDVL GVLQLEADDF LRAGAEGKVD AAEVEGLIQA RLKARADKNW AESDRIRDQL TAMGVVLEDS KGTTTWRLAD
|
| |