Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2880 |
Symbol | |
ID | 1042770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3280063 |
End bp | 3280626 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637146302 |
Product | TetR family transcriptional regulator |
Protein accession | NP_745024 |
Protein GI | 26989599 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.924779 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTACT CCAACGAACA CAAACAGCAA ACCCGCGAAC GGTTGCTGGC CAGCAGCGGC GCGCTGGCCA AGCGCGGGGG TTTTGCCAGT ACCGGCGTGG CCGGGTTGAT GAAAGCGATC GGCCTGACCG GCGGTGCCTT CTACAACCAC TTCCCGTCCA AGGACGACCT GTTTACCGAG GTGGTACGCC AGGAGCTGAG CAACAGCCCC CTGGCACGCC TGGCCAGCAA GGGAGCCAAC CGTGAACGCC TGGGCCGCTG CCTGCAGCAG TACCTGAGCC TGGTCCACCT GCGCAATGCC GAAGGTGGAT GCCCGTTGCC GCCGCTGGGT GTGGAAATCG CCCGGGCCGA CACGCCGGTG CGTGAAGTGG CTGAGCACTG GCTGGTAGAA CTGCACCGGG CCTGGAGCAC AACCCTGGAG GATGAGCAGC TGGCCTGGGT GCTGATCAGC CAGTGCGTAG GGGCATTGCT GGTCGGGCGC ATGCTGGCCA GTGAAAGCGT GCAAGCGCAG GTACTGGGCG CCAGCCGCCA GTTTGTCGAA CAGGCCCTGC ATGAGGCGGA TTAG
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Protein sequence | MRYSNEHKQQ TRERLLASSG ALAKRGGFAS TGVAGLMKAI GLTGGAFYNH FPSKDDLFTE VVRQELSNSP LARLASKGAN RERLGRCLQQ YLSLVHLRNA EGGCPLPPLG VEIARADTPV REVAEHWLVE LHRAWSTTLE DEQLAWVLIS QCVGALLVGR MLASESVQAQ VLGASRQFVE QALHEAD
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