| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2872 |
|---|
| Symbol | |
|---|
| ID | 1042769 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | + |
|---|
| Start bp | 3274144 |
|---|
| End bp | 3275124 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637146294 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_745016 |
|---|
| Protein GI | 26989591 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAACCAT TGGTTTCAAC TGTGCTGGTC CCTTCTCAAG GAATACCGTT ATGCTGTAAC
GAAATATGTC TAAAAAGCCT GCAGAAGGAA GTCGCAATGC CACTCAAGGA CCTGCTTATC
GCCCTGGTGG TGATTGTCGC CTGGGGCGTC AACTTTGTGG TCATCAAGGT TGGCCTCGAC
GGGCTGCCAC CGATGTTGCT GGGGGCATTG CGTTTCTTGC TGGTGGCGTT CCCGGCGATC
TTGCTGGTCA GGCGGCCCAA ACTGCCGTGG CGCTGGCTGA TCGCTTACGG TGCGACCATT
TCACTGGGCC AGTTCGCGTT CCTGTTTCAG GCCATGTACA GCGGCATGCC GCCAGGGTTG
GCTTCGTTGA TCCTGCAGTC GCAAGCCTTC TTCACCCTCG GTTTTGCTGC GTTGTTTCTC
GGTGAGCGGC TGCGCCTGGC CAGCGTGCTG GGGCTGCTGG TGGCGGCCGG CGGCCTGGCA
CTGATCGGCA GCGAAGACGG CGGCCATGTG CCCATGCTGG CGTTGGTGCT GACCCTGTGT
GGCGGTGCGA TGTGGGGCCT GGGCAACATC ATTACCCGAC GGTTCGGCTC GGTCGACCTG
GTCGCGTTGG TGATCTGGGG TGGGCTGATA CCGCCACTTC CATTCCTGGC ACTGTCCTGG
TGGCTGGAAG GCCCCGAGCG CATTGGCCAT GCCTTGGCCA ATATCAGTTG GAGTTCGGTG
CTGGCCCTGG CGTATTTGGC CTTTGTGGCC ACCATGCTCG GCTACAGCCT GTGGAGCAAG
TTGCTGTCGC GTCACCCGGC AGGCAAAGTG GCGCCGTTCT CGCTGCTGGT ACCGGTGATT
GGCCTGAGTT CGTCGGCGTT GCTGCTGGGA GAGCGCCTGA CCGCTACGCA GGGCTGGGGC
GCATTGCTGG TGATGGCCGG CCTGCTGGTG AATGTATTCG GTGCGCGCAT CGGTCAGCGT
TTGCGGGCTG CCAACGCGTA A
|
|---|
| Protein sequence | MQPLVSTVLV PSQGIPLCCN EICLKSLQKE VAMPLKDLLI ALVVIVAWGV NFVVIKVGLD
GLPPMLLGAL RFLLVAFPAI LLVRRPKLPW RWLIAYGATI SLGQFAFLFQ AMYSGMPPGL
ASLILQSQAF FTLGFAALFL GERLRLASVL GLLVAAGGLA LIGSEDGGHV PMLALVLTLC
GGAMWGLGNI ITRRFGSVDL VALVIWGGLI PPLPFLALSW WLEGPERIGH ALANISWSSV
LALAYLAFVA TMLGYSLWSK LLSRHPAGKV APFSLLVPVI GLSSSALLLG ERLTATQGWG
ALLVMAGLLV NVFGARIGQR LRAANA
|
|---|
| |