Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2861 |
Symbol | |
ID | 1042742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3262909 |
End bp | 3264543 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637146283 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | NP_745005 |
Protein GI | 26989580 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.445183 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACTC TGAGATCGAT GTCAATCAGT CGGCGCCTGT GGCTGATCCT TGTGGTGGCG GTGGCCATGC TGGTGGTACT GGGCCTACTG ATGCTGCGGC AGATCCATGG TGACCTGTAC CAGGCCAAGG CGGAGAAAAC CCGCCACGTG GTGCAGACCG CCGCGGGTGT GTTGGCCTAT TACCAAGGCC TGGAAGCTGC CGGCACGCTC AGCCGCGAAG CCGCCCAGCA ACAGGCGCTG CAGGTAGTGC GCGCGCTGCG CTACGACCAT GACGACTATT TCTGGATCAA CGACCTGGGG CCGAAGATGA TCATGCATCC GGCCAACCCC AAGCTCGACG ACCAGGACCT TTCCGCCATC CGCGACCCCG ATGGTTTCGC CGTGTTCAAC GAAATGGTCG CCCTCGCCCG CCAGCAGGAC GCCGGCCCGG TCAACTATCG CTGGCCCAAG CCCGGCGCCA GTGAGCCGGT AGCCAAGACC TCGTATATTC AGCTGTTCAA GCCGTGGGGC TGGATCATCG GTTCGGGCGT GTACGTCGAT GACGTACAGG CCGAATTCGC TCGCCAGTTG CGCGACGCTT CGCTGGTTGG CGTGGGCATT GCCCTGCTGA TGGCGCTGGT GGTCATGCTG ATTGCCCGCA GCATCGCCCG CCCGCTGCAG GAAGCAGTGC AGGCGATGGG CAACATCGCC AGCGGCGAAA GCGACCTGAC CCGGCGCCTG GACACCCATG GCAGCGACGA GATCACCCAC CTTGGCGAGC ACTTCAACCG TTTCAACGGC AAACTGCAAG GTGTCGTCGG CCAACTGCAA GGCGCGGCCC ACGCATTGGC CCAGTCCGCC GGGCACGTCG GTGACAATGC AGGTGCCGCA CAACAGCGCA GTGCCCAGCA ATCGTTACAG ATGGACCAGG TGGCCACTGC AGTCAATGAG GTGACCTACG CCGTGCAGGA CGTGGCCAAG ACCGCTGAAC AGGCCGCCGG AGAAATGCGT ACGGCACAAC AACAGGTGAC GCACGGCCAG CAGGCTATCC ACGGCAGCCT GGCGCAGATC GACCGCCTGT CGCTGACCAT CGATGAGGCC GTACAGGTAA TCCGCGACCT GGCCGGCCAC AGCACGCGCA TCGGCGGCGT GCTGGACGTG ATTCGTTCCA TTGCCGAACA GACCAACCTG CTGGCGCTGA ATGCCGCCAT CGAGGCGGCA CGGGCTGGCG AGCAAGGCCG GGGCTTTGCC GTGGTCGCCG ACGAGGTGCG ACTGTTGGCT CAGCGTACAG CACAATCGAC GGCCGAGATT CATACCATGA TCGAGCACCT GCAGAGTCAG TCGGACGCTG CGGTCAAGGC CATAGACACC AGCAGCGAGG CATCGCGCCA GACCGTCGAA CAAGCCCGCG AGGCCGGCGC CAGCCTGGAC GCCATCAACC AGGTGCTGAA CAACCTCACC GCATTGAACG CCTCCATTGC CAGCGCCACC TTGCAGCAGT CGCATGTGGT CGAAGAGATC AACCGCAATG TGCTGGATAC TGCCGGGTTG TCGCAGCAGA CCGCCGATGC GGCGCGTCAG TCCAGCGATG CCGGGGTGGC ATTGGGGCGG TTGAGCGAAG AGCTGGAGCA GTTGTTGCGG CAGTTCCGGG TCTGA
|
Protein sequence | MNTLRSMSIS RRLWLILVVA VAMLVVLGLL MLRQIHGDLY QAKAEKTRHV VQTAAGVLAY YQGLEAAGTL SREAAQQQAL QVVRALRYDH DDYFWINDLG PKMIMHPANP KLDDQDLSAI RDPDGFAVFN EMVALARQQD AGPVNYRWPK PGASEPVAKT SYIQLFKPWG WIIGSGVYVD DVQAEFARQL RDASLVGVGI ALLMALVVML IARSIARPLQ EAVQAMGNIA SGESDLTRRL DTHGSDEITH LGEHFNRFNG KLQGVVGQLQ GAAHALAQSA GHVGDNAGAA QQRSAQQSLQ MDQVATAVNE VTYAVQDVAK TAEQAAGEMR TAQQQVTHGQ QAIHGSLAQI DRLSLTIDEA VQVIRDLAGH STRIGGVLDV IRSIAEQTNL LALNAAIEAA RAGEQGRGFA VVADEVRLLA QRTAQSTAEI HTMIEHLQSQ SDAAVKAIDT SSEASRQTVE QAREAGASLD AINQVLNNLT ALNASIASAT LQQSHVVEEI NRNVLDTAGL SQQTADAARQ SSDAGVALGR LSEELEQLLR QFRV
|
| |