Gene PP_2861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2861 
Symbol 
ID1042742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3262909 
End bp3264543 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content64% 
IMG OID637146283 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionNP_745005 
Protein GI26989580 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.445183 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACACTC TGAGATCGAT GTCAATCAGT CGGCGCCTGT GGCTGATCCT TGTGGTGGCG 
GTGGCCATGC TGGTGGTACT GGGCCTACTG ATGCTGCGGC AGATCCATGG TGACCTGTAC
CAGGCCAAGG CGGAGAAAAC CCGCCACGTG GTGCAGACCG CCGCGGGTGT GTTGGCCTAT
TACCAAGGCC TGGAAGCTGC CGGCACGCTC AGCCGCGAAG CCGCCCAGCA ACAGGCGCTG
CAGGTAGTGC GCGCGCTGCG CTACGACCAT GACGACTATT TCTGGATCAA CGACCTGGGG
CCGAAGATGA TCATGCATCC GGCCAACCCC AAGCTCGACG ACCAGGACCT TTCCGCCATC
CGCGACCCCG ATGGTTTCGC CGTGTTCAAC GAAATGGTCG CCCTCGCCCG CCAGCAGGAC
GCCGGCCCGG TCAACTATCG CTGGCCCAAG CCCGGCGCCA GTGAGCCGGT AGCCAAGACC
TCGTATATTC AGCTGTTCAA GCCGTGGGGC TGGATCATCG GTTCGGGCGT GTACGTCGAT
GACGTACAGG CCGAATTCGC TCGCCAGTTG CGCGACGCTT CGCTGGTTGG CGTGGGCATT
GCCCTGCTGA TGGCGCTGGT GGTCATGCTG ATTGCCCGCA GCATCGCCCG CCCGCTGCAG
GAAGCAGTGC AGGCGATGGG CAACATCGCC AGCGGCGAAA GCGACCTGAC CCGGCGCCTG
GACACCCATG GCAGCGACGA GATCACCCAC CTTGGCGAGC ACTTCAACCG TTTCAACGGC
AAACTGCAAG GTGTCGTCGG CCAACTGCAA GGCGCGGCCC ACGCATTGGC CCAGTCCGCC
GGGCACGTCG GTGACAATGC AGGTGCCGCA CAACAGCGCA GTGCCCAGCA ATCGTTACAG
ATGGACCAGG TGGCCACTGC AGTCAATGAG GTGACCTACG CCGTGCAGGA CGTGGCCAAG
ACCGCTGAAC AGGCCGCCGG AGAAATGCGT ACGGCACAAC AACAGGTGAC GCACGGCCAG
CAGGCTATCC ACGGCAGCCT GGCGCAGATC GACCGCCTGT CGCTGACCAT CGATGAGGCC
GTACAGGTAA TCCGCGACCT GGCCGGCCAC AGCACGCGCA TCGGCGGCGT GCTGGACGTG
ATTCGTTCCA TTGCCGAACA GACCAACCTG CTGGCGCTGA ATGCCGCCAT CGAGGCGGCA
CGGGCTGGCG AGCAAGGCCG GGGCTTTGCC GTGGTCGCCG ACGAGGTGCG ACTGTTGGCT
CAGCGTACAG CACAATCGAC GGCCGAGATT CATACCATGA TCGAGCACCT GCAGAGTCAG
TCGGACGCTG CGGTCAAGGC CATAGACACC AGCAGCGAGG CATCGCGCCA GACCGTCGAA
CAAGCCCGCG AGGCCGGCGC CAGCCTGGAC GCCATCAACC AGGTGCTGAA CAACCTCACC
GCATTGAACG CCTCCATTGC CAGCGCCACC TTGCAGCAGT CGCATGTGGT CGAAGAGATC
AACCGCAATG TGCTGGATAC TGCCGGGTTG TCGCAGCAGA CCGCCGATGC GGCGCGTCAG
TCCAGCGATG CCGGGGTGGC ATTGGGGCGG TTGAGCGAAG AGCTGGAGCA GTTGTTGCGG
CAGTTCCGGG TCTGA
 
Protein sequence
MNTLRSMSIS RRLWLILVVA VAMLVVLGLL MLRQIHGDLY QAKAEKTRHV VQTAAGVLAY 
YQGLEAAGTL SREAAQQQAL QVVRALRYDH DDYFWINDLG PKMIMHPANP KLDDQDLSAI
RDPDGFAVFN EMVALARQQD AGPVNYRWPK PGASEPVAKT SYIQLFKPWG WIIGSGVYVD
DVQAEFARQL RDASLVGVGI ALLMALVVML IARSIARPLQ EAVQAMGNIA SGESDLTRRL
DTHGSDEITH LGEHFNRFNG KLQGVVGQLQ GAAHALAQSA GHVGDNAGAA QQRSAQQSLQ
MDQVATAVNE VTYAVQDVAK TAEQAAGEMR TAQQQVTHGQ QAIHGSLAQI DRLSLTIDEA
VQVIRDLAGH STRIGGVLDV IRSIAEQTNL LALNAAIEAA RAGEQGRGFA VVADEVRLLA
QRTAQSTAEI HTMIEHLQSQ SDAAVKAIDT SSEASRQTVE QAREAGASLD AINQVLNNLT
ALNASIASAT LQQSHVVEEI NRNVLDTAGL SQQTADAARQ SSDAGVALGR LSEELEQLLR
QFRV