Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2769 |
Symbol | |
ID | 1042160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | + |
Start bp | 3152737 |
End bp | 3153726 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637146191 |
Product | branched-chain amino acid ABC transporter, permease protein, putative |
Protein accession | NP_744913 |
Protein GI | 26989488 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.387381 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTATC GAGAAGCGGG TCAGTTCAGC GTGCGTTACG CCGACGACCG TCGATTCTTC CGCCTGCGCC AGGATCGGCT GGGCTTGGCG GCCTTGGTCC TGTTTGCCTT CATCGGTGTG CCACTGCTGG GCAACGATTA CTGGTTCAGT GCCATCCTGA TTCCATTTCT ACTGTTGTCG CTGGCCGGCC TCGGGCTGAA CCTGCTGACC GGTTATGCCG GGCAACTGTC GCTGGGTTCG GCGGCGTTTA TGGCAGTAGG TGCCTTCGCG GCCTATAATT TCGAGCTGCG CGTGGCGTGG CTGCCGCTGC TGGCCAGCCT GCTGCTCGGC GGCCTGGTGG CGGCGCTGGT GGCCGTGGTG TTCGGCCTGC CAAGCCTGCG CATCAAGGGC TTCTATCTGC TGGTGTCGAC ACTGGCGGCG CAGTTCTTCG TGCCATGGGC GCTGACCCGC TTCAGTTGGT TCAGCAACGA CAGTGCCTCG GGGGTGATCA GCGCGCTGTT CTGGCTGGGC GCCAACCTGG TGCGCAGCGA ACTGGGGCGC AACTGGATGG CGGTGCGCGA CATGGACACC GCCGCCGCAG TGATCGGCAT CCCCCTGTTG AAGACCAAAC TGCTGGCTTT TGCCATCAGC GGCTTCTACC TCGGCGTGGC CGGTTCGCTC TGGGCCTTCA CCTACCTGGG CACGGTGGAG CCACACGGCT TCGACCTGAA CCGCTCGTTC CAGATCCTGT TCATCATCAT TATCGGCGGC CTGGGCAGCA TCCTCGGGAA CTTCCTCGGC GCCGCCTTCA TCGTGCTGTT CCCGGTGCTG CTGTCGAACC TGGCCGGGTT GCTGCCGACT GGGCTGATCG ATGCCGGGCA GATAGAGAAC CTGCAGAAGA TTGCCTTCGG CACGCTGATC ATCATCTTCC TGATCAAGGA ACCGGAGGGC CTGGCGCGCC TCTGGCAACG CTTTCGCGAG CGCGCTCGGC GTTGGCCGTT GCGCTACTGA
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Protein sequence | MLYREAGQFS VRYADDRRFF RLRQDRLGLA ALVLFAFIGV PLLGNDYWFS AILIPFLLLS LAGLGLNLLT GYAGQLSLGS AAFMAVGAFA AYNFELRVAW LPLLASLLLG GLVAALVAVV FGLPSLRIKG FYLLVSTLAA QFFVPWALTR FSWFSNDSAS GVISALFWLG ANLVRSELGR NWMAVRDMDT AAAVIGIPLL KTKLLAFAIS GFYLGVAGSL WAFTYLGTVE PHGFDLNRSF QILFIIIIGG LGSILGNFLG AAFIVLFPVL LSNLAGLLPT GLIDAGQIEN LQKIAFGTLI IIFLIKEPEG LARLWQRFRE RARRWPLRY
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