Gene PP_2750 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2750 
Symbol 
ID1045909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3132802 
End bp3133866 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content65% 
IMG OID637146172 
Productbranched-chain amino acid ABC transporter, permease protein, putative 
Protein accessionNP_744894 
Protein GI26989469 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0595138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTA CCGTTTCACG CTTGGGCGCC GGCTTCGACG AGGCGCCGCT GACCCTGGTG 
CGCCGTCGCT GGCCAGTGGG CCTGCCGTTG CTGCTGCTGG TGGCCTTCGT CGGCTTGCCC
TGGCTGGGCA ACGACTACTG GCTCAACGCG ATCCTGATTC CCTTCCTGGT GCTGTCGCTG
GCCGGGCTGG GGCTGAACGT GCTGACCGGC TACACCGGGC AGACCTCGGT CGGTGCCGCC
GGCTTCATGG CGGTGGGCGC CTTCGCCACC TACGGCCTGC TGCTGCGTGT GCCTGGGCTC
CCGTTGCCGC TGGCGCTGAT CGGCGGCGGG CTGATTGCCG GCCTGGTCGG CTTGCTGTTC
GGCATTCCCA GCTCGCGGAT CAAGGGTTTC TACCTGATGG TCACCACGCT GGCTGCGCAG
TTCTTCCTCG AGTGGGTGTT CGCCAAGTTT CCCTGGTTCT ACAACCATGC CTCGTCCGGC
ACCATCAGTG CACCGCGCCT GGAGTTGTTC AGCCACAGCC TGGCCTCGCC GGTCGGTCGC
TACCTGCTGA CCCTGAGCTG CGTGGTGCTG CTGACCTGGG TCGCGGTCAA CCTGGTGCGC
AGCCAGGTCG GGCGCAACTG GATGGCGATC CGCGACATGG ATACCGCCGC CTCGGTCATC
GGCATTCCAG TGGAGCGCTA CAAACGCCTG GCCTTTGCCG TCAGCTCTTT CTACCTGGGC
ATCGCCGGGG CGCTCTGGGC CTTCGCCTAC CTGGGCACGT CCAGTGCCGG CAGCTTCGAC
ATCAACCGCT CGTTCCAGAT CCTCTTCATC ATCATCATCG GTGGCATGGG CAGTATCGCC
GGCAATTTCA TCGGCGCGGC TTTCATCAGC CTCACACCGA TTCTGCTCAG CCATGCCGGG
CAGTGGCTGT TCGGCGGCAA CGTCGATGCC GGGCAATTGC AGAACCTGCA GAAGATTCTC
TTCGGCTGCC TGATCATCTG GTTCCTGATC AAGGAGCCGG AAGGCCTGGT ACGCCTGCTC
GGCGACCTGC GCGAACGTAT CAGGGTCTGG CCGCTGCGAT TCTGA
 
Protein sequence
MTATVSRLGA GFDEAPLTLV RRRWPVGLPL LLLVAFVGLP WLGNDYWLNA ILIPFLVLSL 
AGLGLNVLTG YTGQTSVGAA GFMAVGAFAT YGLLLRVPGL PLPLALIGGG LIAGLVGLLF
GIPSSRIKGF YLMVTTLAAQ FFLEWVFAKF PWFYNHASSG TISAPRLELF SHSLASPVGR
YLLTLSCVVL LTWVAVNLVR SQVGRNWMAI RDMDTAASVI GIPVERYKRL AFAVSSFYLG
IAGALWAFAY LGTSSAGSFD INRSFQILFI IIIGGMGSIA GNFIGAAFIS LTPILLSHAG
QWLFGGNVDA GQLQNLQKIL FGCLIIWFLI KEPEGLVRLL GDLRERIRVW PLRF