| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2737 |
|---|
| Symbol | |
|---|
| ID | 1042323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida KT2440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002947 |
|---|
| Strand | - |
|---|
| Start bp | 3120688 |
|---|
| End bp | 3121440 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637146159 |
|---|
| Product | short chain dehydrogenase/reductase family oxidoreductase |
|---|
| Protein accession | NP_744881 |
|---|
| Protein GI | 26989456 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.420132 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCT GTTGGCTGAC CGGCGCCAGC AGTGGTATCG GTGCCGCGCT CGCGCAAGTC
CTCCTGGAGC AAGGCCACCA GGTCGCCTTG GGCGGGCGCA ACGCCGACCG CCTTGCCCCG
CTGGCAGAAC GGTTTCCCGG GCAGGCATTG CTGGCCATTG GCGATCTTGA CAACCCGGAG
CAGGTCGCCG GCATCGCTGC GCATATCGAG CAGGCCTGGG GAGGCCTGGA CATGGCCATT
CTCAATGCCG GCACCTGCGA ATACCTGGAG CCTGGGCATT TCGATCCGGC GTTGGTCGAG
CGCGTCATGC GCACCAACCT GCTGGGCGTC AGCTACTGCC TGGCGGCGGC ACTGCCCTTG
CTTCGCGCAG GCAAACGCCC CCACCTGGTG GTGATGGGCA GTTCGGTAAC CTGGCTGGCC
TTGCCCCGCG CTGGCGCCTA TGGGGCGTCC AAGGCCGCAG TGCGCTATCT GGTGGAGTCA
CAGCGAATCG ACCTGGCCCG CGAAGGCATC GCGGTCACCC TGGTGAGCCC AGGCTTCGTG
GACACGCCCC TGACCCGTCG CAACGATTTC CCCATGCCAC AGCTGTGGTC TGCGCAGCGT
GCCGCCCGGC ATATCGCCAG GCGCCTGCCC GGCCGCCCCC TGGAAATCAA CTTCCCCGGT
CTTTTCACCT TGGTGTTGCG CCTGCTCGGG GCGCTGCCCG CGCGCCTGCG CCTGGCGCTG
GGCCAACGCC TCGCCCGTCA TGAACAGGAA TGA
|
|---|
| Protein sequence | MSRCWLTGAS SGIGAALAQV LLEQGHQVAL GGRNADRLAP LAERFPGQAL LAIGDLDNPE
QVAGIAAHIE QAWGGLDMAI LNAGTCEYLE PGHFDPALVE RVMRTNLLGV SYCLAAALPL
LRAGKRPHLV VMGSSVTWLA LPRAGAYGAS KAAVRYLVES QRIDLAREGI AVTLVSPGFV
DTPLTRRNDF PMPQLWSAQR AARHIARRLP GRPLEINFPG LFTLVLRLLG ALPARLRLAL
GQRLARHEQE
|
|---|
| |