Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2725 |
Symbol | pfpI |
ID | 1047013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 3110953 |
End bp | 3111495 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637146147 |
Product | protease PfpI |
Protein accession | NP_744869 |
Protein GI | 26989444 |
COG category | [R] General function prediction only |
COG ID | [COG0693] Putative intracellular protease/amidase |
TIGRFAM ID | [TIGR01382] intracellular protease, PfpI family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAGTG CACAATTGAA CGGCAAGCGC GTGGCCTTTC TGGTCACCGA TGGCTTTGAA CAGGTGGAAC TGACCGGCCC GCGTGAAGCC TTGGAAAACA GCGGCGCGGT GGTCGATATC CTGAGCGAGA AAGAAGGCAC GGTACGTGGC TGGAACCATG ACAAACCCGC CGACGCGTTC AGCGTGGATG CGACTTTCGA CAGTGCGCAG CTTGACCTCT ACGACGCCTT GGTGCTGCCC GGCGGTGTGC AGAACTCCGA CACGATTCGC TTGATCCCCG GTGCGCAGAA ACTGGTAAAA AGCCATGATG CGGCCGGCAG GCCGCTGGCG GTTATCTGCC ACGGCGCGTG GCTGCTGATA TCGAGCGGGT TGGCCAAAGG CAAACGAATG ACCAGCTACA AGACCTTGCA AGATGACATT CGCAACGCGG GCGGTACGTG GGTGGATGAA CAAGTGGTGG TCGATGGCAA CCTCATCACC AGCCGCCAGC CGGACGATAT CCCCGCCTTC AATGAGCAGT TGATCAAGGC ACTGGCAGAC TGA
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Protein sequence | MMSAQLNGKR VAFLVTDGFE QVELTGPREA LENSGAVVDI LSEKEGTVRG WNHDKPADAF SVDATFDSAQ LDLYDALVLP GGVQNSDTIR LIPGAQKLVK SHDAAGRPLA VICHGAWLLI SSGLAKGKRM TSYKTLQDDI RNAGGTWVDE QVVVDGNLIT SRQPDDIPAF NEQLIKALAD
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