Gene PP_2665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPP_2665 
SymbolagmR 
ID1046089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida KT2440 
KingdomBacteria 
Replicon accessionNC_002947 
Strand
Start bp3053242 
End bp3053907 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content58% 
IMG OID637146087 
ProductLuxR family two component transcriptional regulator 
Protein accessionNP_744809 
Protein GI26989384 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.107491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAAA TTCTGATTGC CGACGATCAC CCCCTGTTTC GCGAAGCCAT CCACAATGTC 
ATCAGCGATG GTTTCCAGGG CAGCGAGGTC ATGGAGACCG CCGACCTTGA AAGCGCCCTG
GCCCTGACCC AGACCCATGA CGACCTCGAC CTGATCCTGC TCGACCTGAA CATGCCCGGC
ATGCACGGCC TCAATGGCCT GATCACCCTG CGCAACGAGG CGCCAACCAC GCCGGTGGTC
ATCGTTTCGG CCGAGCAGGA AAAGCAGATC GTGCTGCAGG CCATTACCTA CGGTGCCGTG
GGCTTCATCA CCAAGTCGTC GCCACGCTCA CAGATGATCG AAGCGATCGA GCAGATCCTC
AATGGCAATG TCTACCTGCC GCCAGACATC ATCCGCGCGC AAAAAAGCAG TACCAGCCGG
CGCCATAACG ATGCCCCGAG CTTCCCTCCG GAAATGCTCC AGGCCCTGAC CCGCAAGCAA
CTGCTGGTGC TCGAGCGCAT GACCAAAGGC GAATCGAACA AGCAGATCGC CTACACGCTG
GACATCGCCG AAACCACCGT CAAGGCCCAC GTTTCGGCGA TTTTGCGCAA ACTCAATGTG
CACAACCGGG TACAAGCCAT CCTCAGTGCT GGCGATATCG ATTTTGCTGA TTATCTGCGC
CGTTGA
 
Protein sequence
MYKILIADDH PLFREAIHNV ISDGFQGSEV METADLESAL ALTQTHDDLD LILLDLNMPG 
MHGLNGLITL RNEAPTTPVV IVSAEQEKQI VLQAITYGAV GFITKSSPRS QMIEAIEQIL
NGNVYLPPDI IRAQKSSTSR RHNDAPSFPP EMLQALTRKQ LLVLERMTKG ESNKQIAYTL
DIAETTVKAH VSAILRKLNV HNRVQAILSA GDIDFADYLR R