| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2642 |
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| Symbol | |
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| ID | 1046034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | + |
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| Start bp | 3026633 |
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| End bp | 3028123 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637146064 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | NP_744786 |
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| Protein GI | 26989361 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCCAGC TTCGTAAATG GCAGCCACTG CTCAGGCTCG ATGGGGCACA GGCTTCGTAC
CGGCAGATCG TCGAAGGGCT GGTGGCCGCA ATCAGCGAGG GTCGCCTGCG CCCTGGCACG
CCGTTGCCGG GCACGCGGGA GATGGCGCAA TTGCTGAACG TCAATCGCAA GACCGTGATC
CTTGCTTATG AGGAAGCCGA AACCAAGGGC TGGCTGCAAA GCGTGCAACG CCGGGGCACC
TTCGTCAGCC AGCAGCTGGC GCCTGGCACA GCGGCCGCTT CCGGTGCCGT GCGGCCTTTT
GCCCTGGCGC TGCCAGAGGA ACCTGCCGTT GCCTACTTCA AGGCGAACGA ACAGGCTGTA
GCGCAGCAAG GGCGGCCGGG GGCCTTGTTC TTCGACAACG GCGCCTGTGA CCATCGCCTG
CTGCCACAGG CTGTACTGCA TCGCTATTAC CGCAATGCCT TGCGCAGCAG CTTCACCAGC
AACAGCGTTC GCCACGGCAG CGAGTGCAGC AGCCGCAATC TGCGCAGCGC CCTGGCCGAC
ATGCTGCGGC ACAACCGCAG CCTGAACGTT GGCGCCGAGC ATATCTGCCT GACCCAGGGG
GTGCAGATGT CGCTGTCCCT GGTGGCCAGT GTGTTGCTCA AGCCGGGTGA CGTTGTGCTG
GTCGAGCGCC TGAGTTACCC CCCTGCCTGG GAGATCTTCC GTCAGCTGGG TGCCCGCCTG
GTGACCGTGG AGCTGGACCA TGAGGGTTGC CGGGTCGACC AGCTCGATGC CCTGTGCCGG
CAGCACAAGG TGCGGATGAT GTACATAACG CCCCATCACC AGTTCCCGAC CACGGTCAGC
CTGCCAGCCG GGCGCAGGCA ACAGCTGCTG GAGCTGGCGC GCCAGCATGC CTTTTGCGTG
GTCGAAGAGG ATTACGACTA CGAATACCAC TTTGCCGGGC GGCCCTATCT GCCTTTGGCC
AGCGACCGCC AGCAGCGGCA CGTGATTTAC ATTGGCTCAC TGTCCAAGCC TTTGGGCAGC
ACGTTTCGTT GCAGCTATAT CGTGGCACCG GTGGAAGTGA CAACCGTGCT GGAACGCAGG
GCGATGCTGA CCCTGGGGCA GGGCGATGCA GTCATGCAGC AGATGTTGGC CGACCTGATC
AATGATGGGG AACTGAAGAA GCACTTGCGC CGGGTCAACC GCGAGTACCG GCGCCGGCGC
GAGACTTTGT TGGGGTGCTT GCGCGATGCG TTCGGCGAAC AGATCAGCGT GCAGGCGCCA
GAAGGTGGCC TGGCGCTGTG GGTGAGGTTT GCCGATGAGA TCAACGTGGA TCAGTTGGTC
GACAAAGCGC TGGAACGGGA CCTGGTGGTG CGCAGTGGGC GACAGTTTTC ACCGTTTGGC
CATGCCGAGA ACGCCTTGCG CCTAGGGTTT GCTTCGCTGG ATGCCGATGA GATCCGGCAG
GCGACCCAAC GCCTGGCAGA CGCAGCTAAA GCGATTGGCA AGGCGCGGTA G
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| Protein sequence | MVQLRKWQPL LRLDGAQASY RQIVEGLVAA ISEGRLRPGT PLPGTREMAQ LLNVNRKTVI
LAYEEAETKG WLQSVQRRGT FVSQQLAPGT AAASGAVRPF ALALPEEPAV AYFKANEQAV
AQQGRPGALF FDNGACDHRL LPQAVLHRYY RNALRSSFTS NSVRHGSECS SRNLRSALAD
MLRHNRSLNV GAEHICLTQG VQMSLSLVAS VLLKPGDVVL VERLSYPPAW EIFRQLGARL
VTVELDHEGC RVDQLDALCR QHKVRMMYIT PHHQFPTTVS LPAGRRQQLL ELARQHAFCV
VEEDYDYEYH FAGRPYLPLA SDRQQRHVIY IGSLSKPLGS TFRCSYIVAP VEVTTVLERR
AMLTLGQGDA VMQQMLADLI NDGELKKHLR RVNREYRRRR ETLLGCLRDA FGEQISVQAP
EGGLALWVRF ADEINVDQLV DKALERDLVV RSGRQFSPFG HAENALRLGF ASLDADEIRQ
ATQRLADAAK AIGKAR
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