| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PP_2621 |
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| Symbol | |
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| ID | 1046010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida KT2440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002947 |
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| Strand | - |
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| Start bp | 2996804 |
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| End bp | 2998570 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637146043 |
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| Product | hypothetical protein |
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| Protein accession | NP_744765 |
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| Protein GI | 26989340 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.264727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTGA GAGACCGTTT CAGTGAAGAA CTGCGTTACC TGCACGAACT GGGGAACGAC
TTTGCCAAGG ACAACCCACA ACTCGCGCGG TTGCTTGGCA AAGGTGCCAG CGACCCCGAT
GTCGAACGCC TGATGGAAGC CTTTGCGTTC CTGACCGCCA AGCTACGGCT GAAGCTGGAA
GACGACTTGC CAGAGCTGAC CCATCCCATG CTGCAGTTGC TGTGGCCGAA CTACCTGCGG
CCGCTGCCCA GCGCGACGAT CATCAAGTTC AGCCCGGTGA GACAATCCCT CAGCCAGTCA
CAGCGCATCC CAAAGGGGTC GCGGCTGTTC TCGAAACCGG TAGACGGCGT GGCCTGCGAG
TTCCGCACCT GTACAGCGGT CAACATTCAT CCGTTCGAGA TCGACACGGT CGCAGCCACC
CAGACATCCG ACAGTTCTGT GATCTGCATC GGCCTGCAAT CACTGGTCGA GCGGCCGTTG
AACAGCCTGG GCTGTACCAG CCTCGACTTT TACCTCAGCG GCGATGCCCG AACCGCTCGC
ACGCTTTACC TGTGGGTTTC TCAATACCTC AAGCATGTCA GCGTGACCAT CAACGGCGAG
GTTCGTCGGC TGCCGGCAAA CAGCATCGCT TTCCCAGGGT TCAGCCCCAA CGACGCCTTG
CTGCCTTACC CACAGAACGT CTTTGATGGC TATCGCATCC TGCAGGAGTA CTTCGCGTTC
CCTCAACGCT TCCACTTTTT CAGCGTTACC GGCCTGGAAA AAATCTGGCC AGCTCATGAC
AGCCAGCAGG TAAACCTCGA ATTTCACTTC ACGCGCCAGC TACCCGACTC GCTGCGTGTC
GGCAAAGCAG ATTTCAACCT GTTCTGCGCA CCTGCGGTCA ACCTGTTCCA GCACAGCGCC
GAGCCCATCG ACCTGTCCGG CAAGGACGCC ATGGTTCCAC TGAAGCCCAA GGGCACAGCG
CCGCACGGCT ACGAAATCTT CAGTGTCGAC CAGGTGATCA GCACCCGAAC GACGACTGAC
GGTAACACCG GTGAGCACCT TCGGACCTTC CGTCCCTTCG AGTCCTTCGC CCATGAAATC
GAGCACGTCC AGGGGCGCAC GGCGCTGTAT TACCGCTGCC AGCTGGAAGA GTGCCTGCAC
GGCAATGGCG TCATGCATCG AATCGCCTTC GTCCGCGCCG ACGCCAACAG CTACATAGGC
GAGCTGGAAA CCGCGTCCAT CGACCTCACC TGCACCAATC GGGACCTCCC GCTGGCGCTG
GGCATTGATG ACATCAACAT TCTGACCGAA CTTACGCCGC CTCTGGCCAC CTACACCAAT
CTCTGTACAC CCACCCGCCC CTGTCGCCCG GTGCTGGACG GCCAGTTGCA GTGGGCATTG
ATCTCCAACA TGTCGCTCAA CTACCTGTCC TTGCTCTCGG TAGAGCCGCT GAAAGCGGTG
ATCCGCGCCT ACGACTTCAT GGCCCTGCAC GACATCCAGC AGGCACGCAC CACCCGTAAA
CGCCTGGAAG GTATGCGCGA CATTCATACG CAGCCCATGG ATTGGCTGAT CAAGGGGCAA
CCCATTCGCG GCCTGCACAC CCGGCTGAAA CTGGACCAGA CCGCCTTCCT CTGCGAAGGC
GACTTGTACC TGTTCAGCTG TGTGCTCGCT CATTTCTTCG CCCTGTACGC CAGCATCAAT
TCCTTCCACC AGCTGGAAGT GATCAACACC ACCAATAACG AGCATTACAC ATGGCCAATA
CAGACCGGCA AGCAACCGCT GATCTAG
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| Protein sequence | MSLRDRFSEE LRYLHELGND FAKDNPQLAR LLGKGASDPD VERLMEAFAF LTAKLRLKLE
DDLPELTHPM LQLLWPNYLR PLPSATIIKF SPVRQSLSQS QRIPKGSRLF SKPVDGVACE
FRTCTAVNIH PFEIDTVAAT QTSDSSVICI GLQSLVERPL NSLGCTSLDF YLSGDARTAR
TLYLWVSQYL KHVSVTINGE VRRLPANSIA FPGFSPNDAL LPYPQNVFDG YRILQEYFAF
PQRFHFFSVT GLEKIWPAHD SQQVNLEFHF TRQLPDSLRV GKADFNLFCA PAVNLFQHSA
EPIDLSGKDA MVPLKPKGTA PHGYEIFSVD QVISTRTTTD GNTGEHLRTF RPFESFAHEI
EHVQGRTALY YRCQLEECLH GNGVMHRIAF VRADANSYIG ELETASIDLT CTNRDLPLAL
GIDDINILTE LTPPLATYTN LCTPTRPCRP VLDGQLQWAL ISNMSLNYLS LLSVEPLKAV
IRAYDFMALH DIQQARTTRK RLEGMRDIHT QPMDWLIKGQ PIRGLHTRLK LDQTAFLCEG
DLYLFSCVLA HFFALYASIN SFHQLEVINT TNNEHYTWPI QTGKQPLI
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