Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PP_2620 |
Symbol | |
ID | 1046009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida KT2440 |
Kingdom | Bacteria |
Replicon accession | NC_002947 |
Strand | - |
Start bp | 2995824 |
End bp | 2996840 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637146042 |
Product | hypothetical protein |
Protein accession | NP_744764 |
Protein GI | 26989339 |
COG category | [S] Function unknown |
COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAATA CAGACCGGCA AGCAACCGCT GATCTAGCCG ACAAGTTGCT CTGCGAAGCG CACCAGTACA ACTTCTTCCA GTTGCTGGAG CGGTTGCACG GGCTGCATGG CGATGACCTG GAACCCCGTT GGCCGGACAA GGCCACCCGG CGGCGCGTGC GCCTGGCCTG CGACCCACGG CTGACCTTCC CTGTTTCGGA CGTGTACAAA GCCCAGCGGA TGCCCGCTGA GGAAGCGCGC TACCGCATCA TTGCCACATT CCTGGGGTTG CACGGCACCG ATTCGCCATT GCCCACCTAT TACCTGGAAC AGGTGGCGTA TGAACATGCG CATGGCATCG GTGTACGGCC GGCCTTCTTC GACTTTTTCA ACCATTACCT GCTCAGCCTG TTGCACCGTA TCTGGCGCAA GTACCGCTAT TACATCCGCT TCCAGCCAGG TGCCAGTGAC GGGTTCTCGC AGTACGTGTT TGCCCTGCTG GGGCTTAACG ACAAGCAGTT GCGAGGGGAC ACGGCGCTGC CCTGGAGCCG CCTGCTCAGT TTTGCCGGCG TGATCGCCAG CCGCAGCCGA GCGCCGGGCA CTGTAGCCGG CATCATTGCG CACTGCTTCG ACCTCAAGCA GGTGCACATC CGCGAGTTCG AGACGCGATC AGTCGTCACG CCGTCCAGGC AGCTTGCAAG CCTGGGGCGG ACCAACGGCC AGCTGGGCAG CACGTTCATG ATTGGCAGCC GCACGCGCAC CCGCAGCAGC AAGTTCACCA TCGTGATCAG CGAACTCGAC CAGACGCAGC TGCGGGACTT GCTGCCCAGC GGCATCAACT TCGGCCGTTT GCGTGCACTG ATCGACTTTC TGCTGCGTGA CGGGCTGGCC TATGACCTGG AGCTGCGCCT CAAGCAGAGC GCGTTGTCAC CCTTCTGCTT GCACCGCAGC CAGGGCGCAT ACCTGGGCTG GACCAGCTTC GTCGACGACC GGCATGGCCA GATCAGCCCG GTTGTACGCA TCCGGGGGCG CTCATGA
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Protein sequence | MANTDRQATA DLADKLLCEA HQYNFFQLLE RLHGLHGDDL EPRWPDKATR RRVRLACDPR LTFPVSDVYK AQRMPAEEAR YRIIATFLGL HGTDSPLPTY YLEQVAYEHA HGIGVRPAFF DFFNHYLLSL LHRIWRKYRY YIRFQPGASD GFSQYVFALL GLNDKQLRGD TALPWSRLLS FAGVIASRSR APGTVAGIIA HCFDLKQVHI REFETRSVVT PSRQLASLGR TNGQLGSTFM IGSRTRTRSS KFTIVISELD QTQLRDLLPS GINFGRLRAL IDFLLRDGLA YDLELRLKQS ALSPFCLHRS QGAYLGWTSF VDDRHGQISP VVRIRGRS
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